RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CXorf58Q96LI9 332 aa10.61□□□□□ -0.71
HMBOX1-213ENST00000560269 ZC4H2Q9NQZ6 224 aa10.61□□□□□ -0.71
HMBOX1-213ENST00000560269 A0A0D9SG52 128 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 A0A0G2JLM5 398 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 MFSD2BA6NFX1 497 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 AP2S1P53680 142 aaPredicted RBP10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 DEFA5Q01523 94 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 ATP5G2Q06055 141 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 GAMTQ14353 236 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 VWC2Q2TAL6 325 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 LGALSLQ3ZCW2 172 aaPredicted RBP10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 TCTEX1D4Q5JR98 221 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 ZNF491Q8N8L2 437 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 OR4X2Q8NGF9 303 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 OR5C1Q8NGR4 320 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 ATP6V0BQ99437 205 aa10.6□□□□□ -0.71
HMBOX1-213ENST00000560269 IGHV3-21A0A0B4J1V1 117 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 LAMTOR1Q6IAA8 161 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 TMEM116Q8NCL8 245 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 ZNF502Q8TBZ5 544 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 EEF1AKMT3Q96AZ1 226 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 TXN2Q99757 166 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 TMEM147Q9BVK8 224 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 C21orf62Q9NYP8 219 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 MRPL36Q9P0J6 103 aaKnown RBP10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 FBXL17Q9UF56 701 aa10.59□□□□□ -0.71
HMBOX1-213ENST00000560269 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 HAX1O00165 279 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 TAAR5O14804 337 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 DFFBO76075 338 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 HNRNPCP07910 306 aaKnown RBP eCLIP10.58□□□□□ -0.724e-8■■■■■ 27.3
HMBOX1-213ENST00000560269 NKX2-5P52952 324 aaPredicted RBP10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 MFAP4P55083 255 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 CLINT1Q14677 625 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 ACSM6Q6P461 480 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 TMUB2Q71RG4 321 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 TMEM144Q7Z5S9 345 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 ATP5SQ99766 215 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 WFDC1Q9HC57 220 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 UQCC1Q9NVA1 299 aa10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 FBN1P35555 2871 aaKnown RBP10.58□□□□□ -0.72
HMBOX1-213ENST00000560269 CD28P10747 220 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 CDX1P47902 265 aaPredicted RBP10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 NPBWR1P48145 328 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 RND2P52198 227 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 KRTAP10-3P60369 221 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 AWAT1Q58HT5 328 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 FAM209BQ5JX69 171 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 ZNF343Q6P1L6 599 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 NPIPB3Q92617 1050 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 ARL6Q9H0F7 186 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 WDR83OSQ9Y284 106 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 S4R3C0 116 aa10.57□□□□□ -0.72
HMBOX1-213ENST00000560269 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 SMCO3A2RU48 225 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 BCL2L11O43521 198 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 CLN5O75503 358 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 ACY3Q96HD9 319 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 ARPC5LQ9BPX5 153 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 C19orf24Q9BVV8 132 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 GAR1Q9NY12 217 aaKnown RBP10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 LSM4Q9Y4Z0 139 aaKnown RBP10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 ATRQ13535 2644 aa10.56□□□□□ -0.72
HMBOX1-213ENST00000560269 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 UBE2L5PA0A1B0GUS4 154 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 KANTRA0A1W2PQU2 76 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 TCRBV4S1A1TA0A5B7 111 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 RUNX1Q01196 453 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 ZNF266Q14584 549 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 Q56UQ5 140 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 CLEC19AQ6UXS0 136 aa10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 CITED2Q99967 270 aaPredicted RBP10.55□□□□□ -0.72
HMBOX1-213ENST00000560269 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms