RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 IGHV3OR16-13A0A075B7E8 117 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 IGHV3-74A0A0B4J1X5 117 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 A0A0B4J2A0 478 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 C15orf62A8K5M9 175 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 CEBPZOSA8MTT3 80 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 TMEM50AO95807 157 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 CCR6P51684 374 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 SUB1P53999 127 aaKnown RBP eCLIP8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 ANKRD55Q3KP44 614 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 SLC16A13Q7RTY0 426 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 DUSP18Q8NEJ0 188 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 RNF2Q99496 336 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 SHPKQ9UHJ6 478 aa8.7□□□□□ -1.02
RABGGTA-216ENST00000560243 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 A0A1B0GU03 582 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 LINC00854A0A1B0GVQ3 168 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 CORTO00230 105 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 CHEK1O14757 476 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 TSPAN4O14817 238 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 APOHP02749 345 aaPredicted RBP8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 VAMP1P23763 118 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 OPRK1P41145 380 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 HTR2BP41595 481 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 NPBWR1P48145 328 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 TNFRSF9Q07011 255 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 TMEM128Q5BJH2 165 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 LGI3Q8N145 548 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 LILRB2Q8N423 598 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
RABGGTA-216ENST00000560243 CLN5O75503 358 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 TMEM116Q8NCL8 245 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 SLC24A4Q8NFF2 622 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 SLC25A21Q9BQT8 299 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 HIPK2Q9H2X6 1198 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 RBKSQ9H477 322 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 UBQLN2Q9UHD9 624 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 TENM2Q9NT68 2774 aa8.68□□□□□ -1.02
RABGGTA-216ENST00000560243 IGKV3-7A0A075B6H7 116 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 TRAV14DV4A0A0A6YYC5 116 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 IGHV3-66A0A0C4DH42 116 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 ANXA3P12429 323 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 NPY1RP25929 384 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 RND2P52198 227 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 SRPXP78539 464 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 ODF3L2Q3SX64 289 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 TIGITQ495A1 244 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 ZNF600Q6ZNG1 722 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 OR4X1Q8NH49 305 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 EDA2RQ9HAV5 297 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 FLVCR2Q9UPI3 526 aa8.67□□□□□ -1.02
RABGGTA-216ENST00000560243 RYR3Q15413 4870 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 PITX3O75364 302 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 SFT2D2O95562 160 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 IL7P13232 177 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 BTCP35070 178 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 TFPI2P48307 235 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 INPP1P49441 399 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 RBMS2Q15434 407 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 LAMTOR1Q6IAA8 161 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 CENPSQ8N2Z9 138 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 GBGT1Q8N5D6 347 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 LRTM2Q8N967 370 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 OR1S1Q8NH92 325 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 MUC7Q8TAX7 377 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 DTD1Q8TEA8 209 aa8.66□□□□□ -1.02
RABGGTA-216ENST00000560243 NDUFB6O95139 128 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 IFNA10P01566 189 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 IGLC1P0CG04 106 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 ZNF124Q15973 351 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 NPIPB3Q92617 1050 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 GINS3Q9BRX5 216 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 VSIRQ9H7M9 311 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
RABGGTA-216ENST00000560243 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 DYNC2H1Q8NCM8 4307 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms