RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 IFNA5P01569 189 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 OR8U8P0C7N1 319 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 METTL15P1P0C7V9 234 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 TMEM11P17152 192 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 SNCAP37840 140 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 EXOSC2Q13868 293 aaKnown RBP15.96■□□□□ 0.15
PSEN1-225ENST00000560005 NDUFA5Q16718 116 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 Q8N6K4 173 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 LRRC20Q8TCA0 184 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 RAX2Q96IS3 184 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 ATP5SQ99766 215 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 GGACTQ9BVM4 153 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 SMIM3Q9BZL3 60 aa15.96■□□□□ 0.15
PSEN1-225ENST00000560005 CCL24O00175 119 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 RPL27AP46776 148 aaKnown RBP15.95■□□□□ 0.14
PSEN1-225ENST00000560005 RPL7L1Q6DKI1 246 aaKnown RBP15.95■□□□□ 0.14
PSEN1-225ENST00000560005 LILRB2Q8N423 598 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 TMEM217Q8N7C4 229 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 SLC24A4Q8NFF2 622 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 ARV1Q9H2C2 271 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 LINC00527Q9UJ94 153 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 MOB4Q9Y3A3 225 aa15.95■□□□□ 0.14
PSEN1-225ENST00000560005 NPY1RP25929 384 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 TMEM267Q0VDI3 215 aaPredicted RBP15.94■□□□□ 0.14
PSEN1-225ENST00000560005 HNF4GQ14541 408 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 C5orf64Q2M2E5 130 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 SPINK9Q5DT21 86 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 C9orf66Q5T8R8 295 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 SCGB1C1Q8TD33 95 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 OR4C12Q96R67 309 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 PARD6GQ9BYG4 376 aaPredicted RBP15.94■□□□□ 0.14
PSEN1-225ENST00000560005 FBXL15Q9H469 300 aa15.94■□□□□ 0.14
PSEN1-225ENST00000560005 SLC38A11Q08AI6 406 aa15.93■□□□□ 0.14
PSEN1-225ENST00000560005 CLINT1Q14677 625 aa15.93■□□□□ 0.14
PSEN1-225ENST00000560005 TNXAQ16473 311 aa15.93■□□□□ 0.14
PSEN1-225ENST00000560005 GNPNAT1Q96EK6 184 aaPredicted RBP15.93■□□□□ 0.14
PSEN1-225ENST00000560005 GINS3Q9BRX5 216 aa15.93■□□□□ 0.14
PSEN1-225ENST00000560005 NCBP2LA6PVI3 153 aaKnown RBP15.92■□□□□ 0.14
PSEN1-225ENST00000560005 C15orf62A8K5M9 175 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 CNIH1O95406 144 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 CFDP00746 253 aaPredicted RBP15.92■□□□□ 0.14
PSEN1-225ENST00000560005 IFNA4P05014 189 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 SEC11BP0C7V7 166 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 CNTFRP26992 372 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 DEFB136Q30KP8 78 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 C2orf83Q53S99 150 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 OR8G2PQ6IF36 304 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 SLC25A24Q6NUK1 477 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 SBSPONQ8IVN8 264 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 BSCL2Q96G97 398 aaPredicted RBP15.92■□□□□ 0.14
PSEN1-225ENST00000560005 TMEM147Q9BVK8 224 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 SLC25A32Q9H2D1 315 aa15.92■□□□□ 0.14
PSEN1-225ENST00000560005 SEC14L6B5MCN3 397 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 FNDC10F2Z333 226 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 SLC35B1P78383 322 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 ZFAND6Q6FIF0 208 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 ALKAL2Q6UX46 152 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 ZNF562Q6V9R5 426 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 RASL11BQ9BPW5 248 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 KRTAP17-1Q9BYP8 105 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 WFDC1Q9HC57 220 aa15.91■□□□□ 0.14
PSEN1-225ENST00000560005 ZNF256Q9Y2P7 627 aaPredicted RBP15.91■□□□□ 0.14
PSEN1-225ENST00000560005 PMS2P5A8MQ11 134 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 DLK1P80370 383 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 PJVKQ0ZLH3 352 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 MRGPRG-AS1Q2M3A8 158 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 BSXQ3C1V8 233 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 COMMD1Q8N668 190 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 UQCC1Q9NVA1 299 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 SMAD5-AS1Q9Y6J3 95 aa15.9■□□□□ 0.14
PSEN1-225ENST00000560005 CA2P00918 260 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 RAB5CP51148 216 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 CLLU1Q5K131 121 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 C5orf56Q8N8D9 126 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 OR1L6Q8NGR2 347 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 RNF141Q8WVD5 230 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 SRSF12Q8WXF0 261 aaKnown RBP15.89■□□□□ 0.13
PSEN1-225ENST00000560005 TPSG1Q9NRR2 321 aa15.89■□□□□ 0.13
PSEN1-225ENST00000560005 FGF16O43320 207 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 SOX15O60248 233 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 OR13C7P0DN81 318 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 MYOD1P15172 320 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 GNB1P62873 340 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 ARL16Q0P5N6 197 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 VWC2Q2TAL6 325 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 HAPLN4Q86UW8 402 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 ZNF114Q8NC26 417 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 RNASEH2CQ8TDP1 164 aaKnown RBP15.88■□□□□ 0.13
PSEN1-225ENST00000560005 CACNG8Q8WXS5 425 aa15.88■□□□□ 0.13
PSEN1-225ENST00000560005 CORTO00230 105 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 CYB5BO43169 146 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 MPDU1O75352 247 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 HLA-DRB1P01911 266 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 RPLP1P05386 114 aaKnown RBP15.87■□□□□ 0.13
PSEN1-225ENST00000560005 RNASE2P10153 161 aaKnown RBP15.87■□□□□ 0.13
PSEN1-225ENST00000560005 SPP1P10451 314 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 GPX4P36969 197 aaPredicted RBP15.87■□□□□ 0.13
PSEN1-225ENST00000560005 FXYD3Q14802 87 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 ETFRF1Q6IPR1 90 aa15.87■□□□□ 0.13
PSEN1-225ENST00000560005 LCNL1Q6ZST4 164 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms