RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 IGLV2-8P01709 118 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 MGST1P10620 155 aaKnown RBP8.1□□□□□ -1.11
LRRC28-216ENST00000559819 CNTFRP26992 372 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 LINC00310P59036 64 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 TAS2R45P59539 299 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 UBE2L3P68036 154 aaKnown RBP8.1□□□□□ -1.11
LRRC28-216ENST00000559819 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 PDPNQ86YL7 162 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 TGIF2LXQ8IUE1 241 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 WASHC3Q9Y3C0 194 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 IGKV1D-37A0A075B6S9 117 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 A0A1W2PPI3 338 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 MRGPRG-AS1Q2M3A8 158 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 ST6GALNAC3Q8NDV1 305 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 NAV3Q8IVL0 2385 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 KALRNO60229 2985 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 A0A1W2PN81 502 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 SNURFLB1AK76 121 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 FCN1O00602 326 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 COX7A2P2O60397 106 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 SCGB1D1O95968 90 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 MOSP00540 346 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 IGHV1-8P0DP01 117 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM155Q4W5P6 130 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM186Q96B77 213 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 IGF2BP2-AS1Q96M15 143 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 DNAJC4Q9NNZ3 241 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 ZNF355PQ9NSJ1 428 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 ARL2-SNX15V9GYD0 113 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 DMXL2Q8TDJ6 3036 aa8.09□□□□□ -1.11
LRRC28-216ENST00000559819 CA1P00915 261 aaPredicted RBP8.09□□□□□ -1.12
LRRC28-216ENST00000559819 PAX1P15863 534 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 ATP5IP56385 69 aaPredicted RBP8.09□□□□□ -1.12
LRRC28-216ENST00000559819 TBR1Q16650 682 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 PNKDQ8N490 385 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 C11orf42Q8N5U0 333 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 LINC00311Q8N616 119 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 CMTM2Q8TAZ6 248 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 ZNF596Q8TC21 504 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 ZNF835Q9Y2P0 537 aa8.09□□□□□ -1.12
LRRC28-216ENST00000559819 TRAV34A0A0B4J273 112 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 FOXC1Q12948 553 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 TIGITQ495A1 244 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 C10orf113Q5VZT2 155 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 SERTAD4Q9NUC0 356 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 IGHV1-69-2A0A0G2JMI3 117 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 A0A1B0GV90 55 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 A0A1W2PRE2 83 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 TCRBV4S1A1TA0A5B7 111 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 A8MWP6 167 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 SERF1AO75920 110 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 CRISP2P16562 243 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 MFAP2P55001 183 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 SELENOTP62341 195 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 OR4A5Q8NH83 315 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 VSTM2AQ8TAG5 236 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 MISP3Q96FF7 219 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 MS4A10Q96PG2 267 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 PAXXQ9BUH6 204 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 C19orf24Q9BVV8 132 aa8.08□□□□□ -1.12
LRRC28-216ENST00000559819 MRPL32Q9BYC8 188 aaKnown RBP8.08□□□□□ -1.12
LRRC28-216ENST00000559819 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 C22orf46C9J442 243 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 INS-IGF2F8WCM5 200 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 PPOXP50336 477 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 GNG5P63218 68 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
LRRC28-216ENST00000559819 LINC01560Q8TB33 94 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 FAM168AQ92567 244 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 SSBP3Q9BWW4 388 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-216ENST00000559819 TMEM133Q9H2Q1 129 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 TRAV9-1A0A075B6T8 112 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 RAB4BP61018 213 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 TNXAQ16473 311 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 IQCJQ1A5X6 159 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 IBA57Q5T440 356 aaKnown RBP8.07□□□□□ -1.12
LRRC28-216ENST00000559819 FAM71F2Q6NXP2 309 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 ZNF329Q86UD4 541 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 GSX1Q9H4S2 264 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-216ENST00000559819 OSTCQ9NRP0 149 aa8.07□□□□□ -1.12
LRRC28-216ENST00000559819 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-216ENST00000559819 MUC6Q6W4X9 2439 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
LRRC28-216ENST00000559819 IGLC7A0M8Q6 106 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 VSTM5A8MXK1 200 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 FSTL3O95633 263 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 FAM87AP0C7U9 286 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 ORM2P19652 201 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 COX7A1P24310 79 aa8.06□□□□□ -1.12
LRRC28-216ENST00000559819 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms