RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 AIPO00170 330 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 CSRP1P21291 193 aaKnown RBP1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 G6PCP35575 357 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 EMP1P54849 157 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 TFAMQ00059 246 aaKnown RBP1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 PABPC1L2AQ5JQF8 200 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 FAM27BQ5VT28 67 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 LCA10Q71F78 164 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 MIR17HGQ75NE6 70 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 TRAPPC6BQ86SZ2 158 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 HIST3H2BBQ8N257 126 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 EXOC3-AS1Q8N2X6 119 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 FAM24BQ8N5W8 94 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 OR4X2Q8NGF9 303 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 TERB2Q8NHR7 220 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 GRPEL2Q8TAA5 225 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 TEX47Q8TBZ9 253 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 DYDC1Q8WWB3 177 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 MRPS24Q96EL2 167 aaKnown RBP1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 C20orf166-AS1Q96NR2 134 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 TMEM70Q9BUB7 260 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 SH3BGRL3Q9H299 93 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 MIXL1Q9H2W2 232 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 NDUFAF1Q9Y375 327 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 FMN1Q68DA7 1419 aa1.64□□□□□ -2.15
CTDSPL2-207ENST00000559738 DOCK4Q8N1I0 1966 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 OBSL1O75147 1896 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 A0A1B0GVG6 124 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 MAP1LC3B2A6NCE7 125 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 ZNF860A6NHJ4 632 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 APOA2P02652 100 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 PSMD8P48556 350 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 TMEM258P61165 79 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 YPEL3P61236 119 aaPredicted RBP1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 ERHP84090 104 aaKnown RBP1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 ZNF90Q03938 601 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 RELAQ04206 551 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 LINC01554Q52M75 96 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 DCUN1D2Q6PH85 259 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 KTN1-AS1Q86SY8 53 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 RPP25LQ8N5L8 163 aaKnown RBP1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 LYSMD1Q96S90 227 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 SERPINI1Q99574 410 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 DDA1Q9BW61 102 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 IMUPQ9GZP8 106 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 MAP1LC3BQ9GZQ8 125 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 CHST6Q9GZX3 395 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 OSTCQ9NRP0 149 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 CCL26Q9Y258 94 aa1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 YTHDC2Q9H6S0 1430 aaKnown RBP1.63□□□□□ -2.15
CTDSPL2-207ENST00000559738 SLIT2O94813 1529 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 A0A087X0T9 212 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 RIIAD1A6NNX1 92 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 TSTD3H0UI37 97 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 IGKV1-16P04430 117 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 CSN2P05814 226 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 NFYAP23511 347 aaPredicted RBP1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 KHDC3LQ587J8 217 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 DYNAPQ8N1N2 210 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 SIGLECL1Q8N7X8 197 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 OR8D4Q8NGM9 314 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 WFDC5Q8TCV5 224 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 TMEM106AQ96A25 262 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 NDUFB11Q9NX14 153 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 MED11Q9P086 117 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 PSORS1C2Q9UIG4 136 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 PCTPQ9UKL6 214 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 UHRF1BP1Q6BDS2 1440 aa1.62□□□□□ -2.15
CTDSPL2-207ENST00000559738 ADAMTS7Q9UKP4 1686 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 TONSLQ96HA7 1378 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 SDK2Q58EX2 2172 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 MED1Q15648 1581 aaPredicted RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 TMSB15BA0A087X1C1 80 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 IGHV1-18A0A0C4DH31 117 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 MUC21A0A0G2JKD1 596 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 TRBV10-2A0A0K0K1G8 114 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 MUC21A0A140T8X8 626 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 HMSDA8MTL9 139 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 J3QQQ9 107 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 PFDN1O60925 122 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 TRGC1P0CF51 173 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 CBR1P16152 277 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 S100GP29377 79 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 PEBP1P30086 187 aaKnown RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 SRP14P37108 136 aaKnown RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 RPL26P61254 145 aaKnown RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 EIF5AP63241 154 aaKnown RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 RRN3P1Q2M238 152 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 SCGB2B2Q4G0G5 96 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 BCL2L15Q5TBC7 163 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 LRRC28Q86X40 367 aaPredicted RBP1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 Q8NDZ9 215 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 PFN4Q8NHR9 129 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 STAG3L4Q8TBR4 150 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 PYDC1Q8WXC3 89 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 C11orf40Q8WZ69 217 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 MALSU1Q96EH3 234 aa1.61□□□□□ -2.15
CTDSPL2-207ENST00000559738 OR2J1Q9GZK6 312 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms