RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 GPR61Q9BZJ8 451 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 RAB1BQ9H0U4 201 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 TMEM167BQ9NRX6 74 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 TRAV5A0A0B4J249 113 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 A0A1W2PPR1 153 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 K7EN84 100 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 PPP1R2P9O14990 202 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 APELAP0DMC3 54 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.992e-7■■■□□ 16.3
SPG11-217ENST00000559511 ZNF90Q03938 601 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 PRSS8Q16651 343 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 C19orf35Q6ZS72 473 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 TEX45Q8NA69 505 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 BEND2Q8NDZ0 799 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 SLC25A33Q9BSK2 321 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 C19orf24Q9BVV8 132 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 GAR1Q9NY12 217 aaKnown RBP8.87□□□□□ -0.99
SPG11-217ENST00000559511 INSIG2Q9Y5U4 225 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
SPG11-217ENST00000559511 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
SPG11-217ENST00000559511 C22orf46C9J442 243 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 MFAP2P55001 183 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 LGALS4P56470 323 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 HCP5Q6MZN7 132 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 TEX38Q6PEX7 206 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 C8orf46Q8TAG6 207 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 FAM167A-AS1Q96KT0 104 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 SLC25A2Q9BXI2 301 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 SIGLEC9Q9Y336 463 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 MDFIC2A0A1B0GVS7 189 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 GGTLC3B5MD39 225 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 RBP4P02753 201 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 TYMSP04818 313 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 C8orf88P0DMB2 117 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 TAS2R45P59539 299 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 TNXAQ16473 311 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 LDLRAD2Q5SZI1 272 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 MMD2Q8IY49 270 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 THAP8Q8NA92 274 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 OR8B3Q8NGG8 313 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 OR8B2Q96RD0 313 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 ONECUT1Q9UBC0 465 aa8.86□□□□□ -0.99
SPG11-217ENST00000559511 TCRBV4S1A1TA0A5B7 111 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 C9JCJ5 164 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 CRYBB3P26998 211 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 S100A2P29034 98 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 DTX2Q86UW9 622 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 LY6G5BQ8NDX9 201 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 MRPL32Q9BYC8 188 aaKnown RBP8.85□□□□□ -0.99
SPG11-217ENST00000559511 DNAJC4Q9NNZ3 241 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 MIOXQ9UGB7 285 aa8.85□□□□□ -0.99
SPG11-217ENST00000559511 SVEP1Q4LDE5 3571 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 C19orf84I3L1E1 186 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -0.99
SPG11-217ENST00000559511 COMPP49747 757 aaPredicted RBP8.84□□□□□ -0.99
SPG11-217ENST00000559511 LCN2P80188 198 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 FOXL1Q12952 345 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 PVRIGQ6DKI7 326 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 OR10G8Q8NGN5 311 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 OR10D4PQ8NGN7 298 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 NEU4Q8WWR8 484 aaPredicted RBP8.84□□□□□ -0.99
SPG11-217ENST00000559511 RPEQ96AT9 228 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 MISP3Q96FF7 219 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 EAF1Q96JC9 268 aaPredicted RBP8.84□□□□□ -0.99
SPG11-217ENST00000559511 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 A0A0U1RQK1 487 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 ZNF320A2RRD8 509 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 LIPFP07098 398 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 S100A12P80511 92 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 CENPWQ5EE01 88 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 OR5AU1Q8NGC0 362 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 CHODLQ9H9P2 273 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
SPG11-217ENST00000559511 HELTA6NFD8 242 aa8.83□□□□□ -1
SPG11-217ENST00000559511 MOSP00540 346 aa8.83□□□□□ -1
SPG11-217ENST00000559511 CRYGCP07315 174 aa8.83□□□□□ -1
SPG11-217ENST00000559511 PYYP10082 97 aa8.83□□□□□ -1
SPG11-217ENST00000559511 FABP4P15090 132 aa8.83□□□□□ -1
SPG11-217ENST00000559511 RPL15P61313 204 aaKnown RBP8.83□□□□□ -1
SPG11-217ENST00000559511 UBE2L3P68036 154 aaKnown RBP8.83□□□□□ -1
SPG11-217ENST00000559511 OR5I1Q13606 314 aa8.83□□□□□ -1
SPG11-217ENST00000559511 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
SPG11-217ENST00000559511 CDPF1Q6NVV7 123 aa8.83□□□□□ -1
SPG11-217ENST00000559511 IGFBPL1Q8WX77 278 aa8.83□□□□□ -1
SPG11-217ENST00000559511 RNF2Q99496 336 aa8.83□□□□□ -1
SPG11-217ENST00000559511 FBXL15Q9H469 300 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms