RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SMCO3A2RU48 225 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 I3L521 148 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 SOX15O60248 233 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 AREGP15514 252 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 TMEM41BQ5BJD5 291 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 ACSM6Q6P461 480 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 ZNF562Q6V9R5 426 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 COMMD1Q8N668 190 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 ZNF709Q8N972 641 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 IGHG2P01859 326 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 CX3CL1P78423 397 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 TOR2AQ5JU69 321 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 Q6ZSV7 163 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 MGST2Q99735 147 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 PRSS22Q9GZN4 317 aa13.01□□□□□ -0.33
TPM1-219ENST00000559397 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
TPM1-219ENST00000559397 TSPAN9O75954 239 aa13□□□□□ -0.33
TPM1-219ENST00000559397 TSPAN15O95858 294 aa13□□□□□ -0.33
TPM1-219ENST00000559397 MBP02144 154 aa13□□□□□ -0.33
TPM1-219ENST00000559397 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
TPM1-219ENST00000559397 NDPQ00604 133 aa13□□□□□ -0.33
TPM1-219ENST00000559397 GAMTQ14353 236 aa13□□□□□ -0.33
TPM1-219ENST00000559397 TEPPQ6URK8 271 aa13□□□□□ -0.33
TPM1-219ENST00000559397 Q8N2B8 174 aa13□□□□□ -0.33
TPM1-219ENST00000559397 OR1P1Q8NH06 330 aa13□□□□□ -0.33
TPM1-219ENST00000559397 MBD3L1Q8WWY6 194 aa13□□□□□ -0.33
TPM1-219ENST00000559397 GGTLC1Q9BX51 225 aa13□□□□□ -0.33
TPM1-219ENST00000559397 CNIH1O95406 144 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 REG1AP05451 166 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 CRYBA1P05813 215 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 OPRK1P41145 380 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 MFAP2P55001 183 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 FXYD3Q14802 87 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 C9orf152Q5JTZ5 239 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 SCRT1Q9BWW7 348 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
TPM1-219ENST00000559397 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
TPM1-219ENST00000559397 MLANAQ16655 118 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 FFAR4Q5NUL3 377 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
TPM1-219ENST00000559397 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
TPM1-219ENST00000559397 RCC1LQ96I51 464 aaKnown RBP12.99□□□□□ -0.33
TPM1-219ENST00000559397 FNDC4Q9H6D8 234 aaPredicted RBP12.99□□□□□ -0.33
TPM1-219ENST00000559397 AGPAT2O15120 278 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 NDUFA7O95182 113 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 CRYGCP07315 174 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 EGR2P11161 476 aaPredicted RBP12.98□□□□□ -0.33
TPM1-219ENST00000559397 RAB2AP61019 212 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 SLC35E3Q7Z769 313 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 KCNIP2Q9NS61 270 aa12.98□□□□□ -0.33
TPM1-219ENST00000559397 KRBOX1C9JBD0 128 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 HBE1P02100 147 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 CD5P06127 495 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 CTRB1P17538 263 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 ZP3P21754 424 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 SRSF3P84103 164 aaKnown RBP12.97□□□□□ -0.33
TPM1-219ENST00000559397 RAB31Q13636 194 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
TPM1-219ENST00000559397 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 CORTO00230 105 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 YIF1AO95070 293 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 IGF1P05019 195 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 APELAP0DMC3 54 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 M6PRP20645 277 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.33
TPM1-219ENST00000559397 CCL20P78556 96 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
TPM1-219ENST00000559397 SSX7Q7RTT5 188 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 BPIFCQ8NFQ6 507 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 LINC00052Q96N35 136 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
TPM1-219ENST00000559397 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
TPM1-219ENST00000559397 CRIP2P52943 208 aaPredicted RBP12.96□□□□□ -0.34
TPM1-219ENST00000559397 PRR20EP86478 221 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 PRR20CP86479 221 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 PRR20DP86480 221 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 PRR20BP86481 221 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 PRR20AP86496 221 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.96□□□□□ -0.34
TPM1-219ENST00000559397 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms