RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 RSG1Q9BU20 258 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 PARLQ9H300 379 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 CCL28Q9NRJ3 127 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 KCNIP1Q9NZI2 227 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 ONECUT1Q9UBC0 465 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 CACNG5Q9UF02 275 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 LY96Q9Y6Y9 160 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 ARL2-SNX15V9GYD0 113 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 IGKV1D-17A0A075B6S4 117 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 IGKV1-6A0A0C4DH72 117 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 ANKRD30BLA7E2S9 258 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 J3QT63 122 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 RHBDL1O75783 438 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 MMP23AO75900 390 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 PRB2P02812 416 aaPredicted RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 PSG2P11465 335 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 NDUFB7P17568 137 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 BCL3P20749 454 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 SAA4P35542 130 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 UBE2E1P51965 193 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 SELENOTP62341 195 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 RPP30P78346 268 aaKnown RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 TMEM267Q0VDI3 215 aaPredicted RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 CATR1Q13166 79 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 C4orf48Q5BLP8 95 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 SAMD5Q5TGI4 173 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 CALHM1Q8IU99 346 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 TGIF2LXQ8IUE1 241 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 MRPL41Q8IXM3 137 aaKnown RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 RPP25LQ8N5L8 163 aaKnown RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 OR10P1Q8NGE3 313 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 OR51H1Q8NH63 302 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 NEK7Q8TDX7 302 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 OR5P3Q8WZ94 311 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 CYYR1Q96J86 154 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 OR4C12Q96R67 309 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 PRO1933Q9H354 126 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 MBNL3Q9NUK0 354 aaKnown RBP4.71□□□□□ -1.66
USP3-212ENST00000559276 FKBP11Q9NYL4 201 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 ZNF581Q9P0T4 197 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 NAGKQ9UJ70 344 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 POLDIP2Q9Y2S7 368 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 CBY1Q9Y3M2 126 aa4.71□□□□□ -1.66
USP3-212ENST00000559276 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 A0A0G2JRQ6 117 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 UBE2L5PA0A1B0GUS4 154 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 ADARB2-AS1A8MUL3 147 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 ZNF705GA8MUZ8 300 aaPredicted RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 H3BUX3 64 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 M0R1W7 72 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 NDUFB3O43676 98 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 KRASP01116 189 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 IGKV1-5P01602 117 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 MT-ND6P03923 174 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 P0C879 139 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 CD1BP29016 333 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 TPPP2P59282 170 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 SUMO1P63165 101 aaKnown RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 MZT1Q08AG7 82 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 AARDQ4LEZ3 155 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 FBLN7Q53RD9 439 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 DMRTC1Q5HYR2 192 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 LDLRAD2Q5SZI1 272 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 TOMM20LQ6UXN7 152 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 ZNF497Q6ZNH5 498 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 HAPLN4Q86UW8 402 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 FAM58AQ8N1B3 248 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 DYNAPQ8N1N2 210 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 ZNF645Q8N7E2 425 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 C11orf44Q8N8P7 122 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 ZNRF1Q8ND25 227 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 OR10G9Q8NGN4 311 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 OR10G7Q8NGN6 311 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 MEGF9Q9H1U4 602 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 SLC25A10Q9UBX3 287 aaPredicted RBP4.7□□□□□ -1.66
USP3-212ENST00000559276 FUT9Q9Y231 359 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 PXMP4Q9Y6I8 212 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 RYR3Q15413 4870 aa4.7□□□□□ -1.66
USP3-212ENST00000559276 TRAV24A0A0B4J272 114 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 A0A1W2PPQ1 181 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 C11orf94C9JXX5 98 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 H3BP45 60 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 RAB29O14966 203 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 NXPH2O95156 264 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 IGKV1-39P01597 117 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 IGKV1D-39P04432 117 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 IL3RAP26951 378 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
USP3-212ENST00000559276 GPM6AP51674 278 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 FGF8P55075 233 aaPredicted RBP4.69□□□□□ -1.66
USP3-212ENST00000559276 ARL16Q0P5N6 197 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 ODF1Q14990 250 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 LY6EQ16553 131 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms