RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 RAB2BQ8WUD1 216 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 GRAMD2BQ96HH9 432 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 TBC1D24Q9ULP9 559 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 LOC100506127A0A0U1RQW1 187 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 A0A1W2PS18 150 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 M0R2N4 97 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 TMEM50AO95807 157 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 IGKV1-39P01597 117 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 IGKV1D-39P04432 117 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZNF688P0C7X2 276 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 P0DMU3 169 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 NAT1P18440 290 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 NPPCP23582 126 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 CSNK1G2-AS1Q8NCQ2 148 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 S100A16Q96FQ6 103 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
CDC42BPB-205ENST00000559245 S100GP29377 79 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 C12orf74Q32Q52 190 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 GPR107Q5VW38 600 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZNF767PQ75MW2 155 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 TBC1D26Q86UD7 250 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 MRGPRFQ96AM1 343 aa11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-205ENST00000559245 HRH1P35367 487 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 P2RY1P47900 373 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 ACTL10Q5JWF8 245 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 DCANP1Q8TF63 244 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 METTL26Q96S19 204 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 NDUFAF3Q9BU61 184 aa11.7□□□□□ -0.54
CDC42BPB-205ENST00000559245 H3BMQ9 156 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 CRYBB3P26998 211 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 SNCAP37840 140 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 PPP5CP53041 499 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 TAS2R20P59543 309 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 IZUMO4Q1ZYL8 232 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 TMEM69Q5SWH9 247 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 LPCAT3Q6P1A2 487 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 LYSMD2Q8IV50 215 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
CDC42BPB-205ENST00000559245 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 NACAE9PAV3 2078 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 TMEM127O75204 238 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 HLA-DMAP28067 261 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 UBE2NLQ5JXB2 153 aa11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 MRPL36Q9P0J6 103 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 RSL24D1Q9UHA3 163 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-205ENST00000559245 CORTO00230 105 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 CLN5O75503 358 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 PRSS3P35030 304 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 TSPAN5P62079 268 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 SLC35G3Q8N808 338 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 RAB40CQ96S21 281 aa11.67□□□□□ -0.54
CDC42BPB-205ENST00000559245 INS-IGF2F8WCM5 200 aa11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 NPY1RP25929 384 aa11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 SUB1P53999 127 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 DHRS2Q13268 280 aa11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 PSMG4Q5JS54 123 aa11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 SAMD12Q8N8I0 201 aa11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 FNDC4Q9H6D8 234 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-205ENST00000559245 A0A0B4J293 547 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 HELTA6NFD8 242 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 IFNA17P01571 189 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 OPRK1P41145 380 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 UCP3P55916 312 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 NCS1P62166 190 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 MLANAQ16655 118 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 CROCCP3Q8IVE0 287 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 C1QTNF4Q9BXJ3 329 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 KRTAP4-5Q9BYR2 181 aa11.65□□□□□ -0.54
CDC42BPB-205ENST00000559245 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 IFNA10P01566 189 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 P0C879 139 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 VBP1P61758 197 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 SPCS2Q15005 226 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 TIGITQ495A1 244 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 DYNC2LI1Q8TCX1 351 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 GPX8Q8TED1 209 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 U3KQE9 123 aa11.64□□□□□ -0.55
CDC42BPB-205ENST00000559245 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 NOL3O60936 208 aaKnown RBP11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms