RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TTTY12Q9BZ98 90 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 IMUPQ9GZP8 106 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 PCBD2Q9H0N5 130 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 BIN3Q9NQY0 253 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 C8orf4Q9NR00 106 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 LYRM2Q9NU23 88 aaPredicted RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 PRNDQ9UKY0 176 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ZSWIM8A7E2V4 1837 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 HECW1Q76N89 1606 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TRPM6Q9BX84 2022 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 REREQ9P2R6 1566 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 KIF13BQ9NQT8 1826 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 A0A087X0T9 212 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 A0A0D9SG52 128 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 A0A0G2JQZ4 141 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 A0A1B0GV72 72 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 MEIS3P1A6NDR6 274 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 RIIAD1A6NNX1 92 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 H0YJX3 145 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 LY6LH3BQJ8 138 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 TCL1BO95988 128 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 APOA2P02652 100 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 PMP2P02689 132 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 HTR1AP08908 422 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 IFI30P13284 250 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 CYBAP13498 195 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 IDO1P14902 403 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 SPI1P17947 270 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 CRYBA4P53673 196 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 SCGB2B2Q4G0G5 96 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 DYNAPQ8N1N2 210 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 C12orf45Q8N5I9 185 aaPredicted RBP1.13□□□□□ -2.23
GABPB1-209ENST00000559100 FAM24BQ8N5W8 94 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 SIGLECL1Q8N7X8 197 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.13□□□□□ -2.23
GABPB1-209ENST00000559100 OR52R1Q8NGF1 315 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 OR8B3Q8NGG8 313 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 DYDC1Q8WWB3 177 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 HIST1H2BLQ99880 126 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 ACER3Q9NUN7 267 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 BAIAP2Q9UQB8 552 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 SLIT2O94813 1529 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 DOCK6Q96HP0 2047 aa1.13□□□□□ -2.23
GABPB1-209ENST00000559100 PXDNLA1KZ92 1463 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 ROCK1Q13464 1354 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 CAMSAP1Q5T5Y3 1602 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 KDM5BQ9UGL1 1544 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 IGLV3-9A0A075B6K5 115 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 TRAV4A0A0B4J268 109 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 DUXBA0A1W2PPF3 345 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 OR51F1A6NGY5 319 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 PPP5D1E7EU14 171 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 PFDN1O60925 122 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 IFNA21P01568 189 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 CRHP06850 196 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 CRYGAP11844 174 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 SRIP30626 198 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 G6PCP35575 357 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 KRTAP10-10P60014 251 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 B2MP61769 119 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 RRN3P1Q2M238 152 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 GRINAQ7Z429 371 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 PFN4Q8NHR9 129 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 DCANP1Q8TF63 244 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 MALSU1Q96EH3 234 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 TIMM21Q9BVV7 248 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 BOLA2Q9H3K6 86 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 MED11Q9P086 117 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 AMMECR1Q9Y4X0 333 aaPredicted RBP1.12□□□□□ -2.23
GABPB1-209ENST00000559100 COL4A4P53420 1690 aaPredicted RBP1.12□□□□□ -2.23
GABPB1-209ENST00000559100 RTEL1-TNFRSF6BF6WH68 1400 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 FMN1Q68DA7 1419 aa1.12□□□□□ -2.23
GABPB1-209ENST00000559100 SCN10AQ9Y5Y9 1956 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 TAX1BP3O14907 124 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 C1QBP02746 253 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 IGKV1-16P04430 117 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 RPSAP08865 295 aaKnown RBP1.11□□□□□ -2.23
GABPB1-209ENST00000559100 NFYBP25208 207 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 PSMD8P48556 350 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF345Q14585 488 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 C7orf65Q6ZTY9 151 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 DHFR2Q86XF0 187 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 EXOC3-AS1Q8N2X6 119 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 Q8NDZ9 215 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 OR10J5Q8NHC4 309 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 RNASE11Q8TAA1 199 aaKnown RBP1.11□□□□□ -2.23
GABPB1-209ENST00000559100 STAG3L4Q8TBR4 150 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 WFDC5Q8TCV5 224 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 MBD3L1Q8WWY6 194 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 LYSMD1Q96S90 227 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 OR2J1Q9GZK6 312 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 YIPF3Q9GZM5 350 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 SH3BGRL3Q9H299 93 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 NHP2Q9NX24 153 aaKnown RBP1.11□□□□□ -2.23
GABPB1-209ENST00000559100 PRO2289Q9P1D8 64 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 PCTPQ9UKL6 214 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 EPDR1Q9UM22 224 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 MYO16Q9Y6X6 1858 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms