RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 NDUFA4O00483 81 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 NUPL2O15504 423 aaKnown RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 GNG7O60262 68 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 CTSDP07339 412 aaPredicted RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 ELK1P19419 428 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 MALP21145 153 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 RCVRNP35243 200 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 AKR1C2P52895 323 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 TRIM16LQ309B1 348 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 RNASE10Q5GAN6 216 aaKnown RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 LAMTOR1Q6IAA8 161 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 LPCAT3Q6P1A2 487 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 HSD17B13Q7Z5P4 300 aaPredicted RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 APRG1Q8IVJ8 170 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 RNASE11Q8TAA1 199 aaKnown RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 GPX8Q8TED1 209 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 TSC22D3Q99576 134 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 SPAG8Q99932 426 aaPredicted RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 OVOL2Q9BRP0 275 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 ZNF436Q9C0F3 470 aaPredicted RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 NAA50Q9GZZ1 169 aaKnown RBP5.44□□□□□ -1.54
SPG11-213ENST00000558988 C5orf66Q9H5L9 145 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 ANAPC10Q9UM13 185 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 SLC45A2Q9UMX9 530 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 TRAV25A0A0B4J276 109 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 IGHV3-66A0A0C4DH42 116 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 OR4C46A6NHA9 309 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 IGKV1-39P01597 117 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 APOA1P02647 267 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 IGKV1D-39P04432 117 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 C8orf88P0DMB2 117 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 RORCP51449 518 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 APOC4P55056 127 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 ODF3L2Q3SX64 289 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 SCGB2B2Q4G0G5 96 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 SPSB3Q6PJ21 355 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 SLC35G3Q8N808 338 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 TMEM116Q8NCL8 245 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 RNF2Q99496 336 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 RHPN1-AS1Q9BWJ2 59 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 SCPEP1Q9HB40 452 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 TMEM14BQ9NUH8 114 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 FKBP11Q9NYL4 201 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 EXTL2Q9UBQ6 330 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 KLK11Q9UBX7 282 aa5.43□□□□□ -1.54
SPG11-213ENST00000558988 IGHV7-4-1A0A0J9YVY3 117 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 TSPAN4O14817 238 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 RGS5O15539 181 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 SPRY2O43597 315 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 LY6G6CO95867 125 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 MT-CO2P00403 227 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 IFNA17P01571 189 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 CD3DP04234 171 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 CTSGP08311 255 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 FCGR2BP31994 310 aaPredicted RBP5.42□□□□□ -1.54
SPG11-213ENST00000558988 SNCAP37840 140 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 HOXA1P49639 335 aaPredicted RBP5.42□□□□□ -1.54
SPG11-213ENST00000558988 MFAP4P55083 255 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 PIGPP57054 158 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 ERHP84090 104 aaKnown RBP5.42□□□□□ -1.54
SPG11-213ENST00000558988 PRCDQ00LT1 54 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 RELQ04864 619 aaPredicted RBP5.42□□□□□ -1.54
SPG11-213ENST00000558988 KLK9Q2XQG4 91 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 SP6Q3SY56 376 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 GPR107Q5VW38 600 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 LYG2Q86SG7 212 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 OR1P1Q8NH06 330 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 OR52I2Q8NH67 350 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 SEC22AQ96IW7 307 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 CMTM3Q96MX0 182 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 TP53RKQ96S44 253 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 PDCD10Q9BUL8 212 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 ENY2Q9NPA8 101 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 COPZ2Q9P299 210 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 SMPXQ9UHP9 88 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 KLK9Q9UKQ9 250 aa5.42□□□□□ -1.54
SPG11-213ENST00000558988 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 TRAV14DV4A0A0A6YYC5 116 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 C15orf62A8K5M9 175 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 I3L2K1 104 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 CHEK1O14757 476 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 ST8SIA3O43173 380 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 NXPH3O95157 252 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 IGKV1-5P01602 117 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 FGF2P09038 288 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 ETV6P41212 452 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 EWSR1Q01844 656 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPG11-213ENST00000558988 LEMD1Q68G75 181 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 FAAP20Q6NZ36 180 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 TCF24Q7RTU0 167 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 OR4D10Q8NGI6 311 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 AP3S1Q92572 193 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 C6orf62Q9GZU0 229 aaPredicted RBP5.41□□□□□ -1.54
SPG11-213ENST00000558988 FAM30AQ9NZY2 134 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 RABAC1Q9UI14 185 aa5.41□□□□□ -1.54
SPG11-213ENST00000558988 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 TEX13DA0A0J9YY54 714 aaPredicted RBP5.4□□□□□ -1.54
SPG11-213ENST00000558988 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.54
SPG11-213ENST00000558988 K7EMT4 169 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms