RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ARPC5LQ9BPX5 153 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 TMEM147Q9BVK8 224 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 KANTRA0A1W2PQU2 76 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 BCL2L11O43521 198 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 DFFBO76075 338 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 IGHV3-48P01763 117 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 ELANEP08246 267 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 TPPP2P59282 170 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 GAMTQ14353 236 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 C15orf32Q32M92 178 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 KLHDC1Q8N7A1 406 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 VN1R17PQ8TDU5 208 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 UQCC1Q9NVA1 299 aa14.07□□□□□ -0.16
CLPX-203ENST00000558958 MRPL36Q9P0J6 103 aaKnown RBP14.07□□□□□ -0.16
CLPX-203ENST00000558958 SETD2Q9BYW2 2564 aaPredicted RBP14.07□□□□□ -0.16
CLPX-203ENST00000558958 CLPSL1A2RUU4 121 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 MFSD2BA6NFX1 497 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 OPCMLQ14982 345 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 COMMD1Q8N668 190 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 RNF152Q8N8N0 203 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 TMEM116Q8NCL8 245 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 USMG5Q96IX5 58 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 SLC35E1Q96K37 410 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 CYTL1Q9NRR1 136 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 MDKP21741 143 aaPredicted RBP14.06□□□□□ -0.16
CLPX-203ENST00000558958 ATP5G2Q06055 141 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 RPL7L1Q6DKI1 246 aaKnown RBP14.06□□□□□ -0.16
CLPX-203ENST00000558958 OR5AU1Q8NGC0 362 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 CXorf58Q96LI9 332 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 NPVFQ9HCQ7 196 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 RNF114Q9Y508 228 aa14.06□□□□□ -0.16
CLPX-203ENST00000558958 UBE2L5PA0A1B0GUS4 154 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 C4BPBP20851 252 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 RND2P52198 227 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 PROK1P58294 105 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 KIAA0141Q14154 515 aaPredicted RBP14.05□□□□□ -0.16
CLPX-203ENST00000558958 ZNF266Q14584 549 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 TREML4Q6UXN2 200 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 TMEM144Q7Z5S9 345 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 PRIMA1Q86XR5 153 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.05□□□□□ -0.16
CLPX-203ENST00000558958 OR4X1Q8NH49 305 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 MYOZ3Q8TDC0 251 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 NPIPB3Q92617 1050 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 ACY3Q96HD9 319 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 C21orf62Q9NYP8 219 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 S4R3C0 116 aa14.05□□□□□ -0.16
CLPX-203ENST00000558958 A0A0G2JLM5 398 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 JTBO76095 146 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 RPLP1P05386 114 aaKnown RBP14.04□□□□□ -0.16
CLPX-203ENST00000558958 MFAP4P55083 255 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 AKR1C1Q04828 323 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 ACSM6Q6P461 480 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 ZNF502Q8TBZ5 544 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 WDR83OSQ9Y284 106 aa14.04□□□□□ -0.16
CLPX-203ENST00000558958 BORCS7-ASMTA0A0B4J1R7 106 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 A0A1B0GUS0 222 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 F8W735 103 aaPredicted RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 IFNA5P01569 189 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 FCGR2BP31994 310 aaPredicted RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 TCTEX1D4Q5JR98 221 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 UBAC2Q8NBM4 344 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 EEF1AKMT3Q96AZ1 226 aa14.03□□□□□ -0.16
CLPX-203ENST00000558958 ZNF471Q9BX82 626 aaPredicted RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 PARD6GQ9BYG4 376 aaPredicted RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 WDR61Q9GZS3 305 aaKnown RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 LSM4Q9Y4Z0 139 aaKnown RBP14.03□□□□□ -0.16
CLPX-203ENST00000558958 IGKV1OR2-108A0A075B7D4 117 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 TRBV7-1A0A0A6YYK4 115 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 CLN5O75503 358 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 IGHV3-23P01764 117 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 NPBWR1P48145 328 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 TEPPQ6URK8 271 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 SLC51BQ86UW2 128 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 ZNF491Q8N8L2 437 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 THAP8Q8NA92 274 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 OR4X2Q8NGF9 303 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 CCDC140Q96MF4 163 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 TXN2Q99757 166 aa14.02□□□□□ -0.16
CLPX-203ENST00000558958 HAX1O00165 279 aa14.01□□□□□ -0.17
CLPX-203ENST00000558958 BTNL8Q6UX41 500 aa14.01□□□□□ -0.17
CLPX-203ENST00000558958 ATP6V0BQ99437 205 aa14.01□□□□□ -0.17
CLPX-203ENST00000558958 ARV1Q9H2C2 271 aa14.01□□□□□ -0.17
CLPX-203ENST00000558958 IGKV1D-37A0A075B6S9 117 aa14□□□□□ -0.17
CLPX-203ENST00000558958 MPDU1O75352 247 aa14□□□□□ -0.17
CLPX-203ENST00000558958 FGF7P21781 194 aa14□□□□□ -0.17
CLPX-203ENST00000558958 FOXL1Q12952 345 aa14□□□□□ -0.17
CLPX-203ENST00000558958 Q56UQ5 140 aa14□□□□□ -0.17
CLPX-203ENST00000558958 ZNF343Q6P1L6 599 aa14□□□□□ -0.17
CLPX-203ENST00000558958 STOML3Q8TAV4 291 aa14□□□□□ -0.17
CLPX-203ENST00000558958 SCGB1C1Q8TD33 95 aa14□□□□□ -0.17
CLPX-203ENST00000558958 UBE2E2Q96LR5 201 aa14□□□□□ -0.17
CLPX-203ENST00000558958 ATRQ13535 2644 aa14□□□□□ -0.17
CLPX-203ENST00000558958 GNG7O60262 68 aa13.99□□□□□ -0.17
CLPX-203ENST00000558958 IGHV3-11P01762 117 aa13.99□□□□□ -0.17
CLPX-203ENST00000558958 CLEC3BP05452 202 aa13.99□□□□□ -0.17
CLPX-203ENST00000558958 IGLC1P0CG04 106 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms