RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FAUP35544 74 aaKnown RBP9.03□□□□□ -0.96
TPM1-216ENST00000558910 OPRK1P41145 380 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 TMEM187Q14656 261 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 SURF2Q15527 256 aaPredicted RBP9.03□□□□□ -0.96
TPM1-216ENST00000558910 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 SPANXN2Q5MJ10 180 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 LYZL2Q7Z4W2 148 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 CCDC190Q86UF4 302 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 TMEM190Q8WZ59 177 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 SCGB3A2Q96PL1 93 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
TPM1-216ENST00000558910 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
TPM1-216ENST00000558910 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 CTSGP08311 255 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
TPM1-216ENST00000558910 CCR6P51684 374 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
TPM1-216ENST00000558910 AP3S2P59780 193 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 HAGHQ16775 308 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 TRIQKQ629K1 86 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 DUSP18Q8NEJ0 188 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 OR2K2Q8NGT1 345 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 KRTAP9-9Q9BYP9 154 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 KRTAP9-4Q9BYQ2 154 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 ZNF436Q9C0F3 470 aaPredicted RBP9.02□□□□□ -0.97
TPM1-216ENST00000558910 MRPL36Q9P0J6 103 aaKnown RBP9.02□□□□□ -0.97
TPM1-216ENST00000558910 PAIP2BQ9ULR5 123 aaKnown RBP9.02□□□□□ -0.97
TPM1-216ENST00000558910 TENM3Q9P273 2699 aa9.02□□□□□ -0.97
TPM1-216ENST00000558910 A8MWP6 167 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 NDUFA4O00483 81 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 SULT1A3P0DMM9 295 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 SULT1A4P0DMN0 295 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 SPCS3P61009 180 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 BAK1Q16611 211 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 SLC16A13Q7RTY0 426 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 CADM3Q8N126 398 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 OR1S1Q8NH92 325 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 DAZ1Q9NQZ3 744 aaKnown RBP9.01□□□□□ -0.97
TPM1-216ENST00000558910 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 MRPL27Q9P0M9 148 aaKnown RBP9.01□□□□□ -0.97
TPM1-216ENST00000558910 STAB2Q8WWQ8 2551 aa9.01□□□□□ -0.97
TPM1-216ENST00000558910 RBMY1BA6NDE4 496 aaKnown RBP9□□□□□ -0.97
TPM1-216ENST00000558910 RBMY1EA6NEQ0 496 aaKnown RBP9□□□□□ -0.97
TPM1-216ENST00000558910 B3GALNT1O75752 331 aa9□□□□□ -0.97
TPM1-216ENST00000558910 RBMY1DP0C7P1 496 aaKnown RBP9□□□□□ -0.97
TPM1-216ENST00000558910 IAPPP10997 89 aa9□□□□□ -0.97
TPM1-216ENST00000558910 ANXA3P12429 323 aa9□□□□□ -0.97
TPM1-216ENST00000558910 NPBWR1P48145 328 aa9□□□□□ -0.97
TPM1-216ENST00000558910 SUPT4H1P63272 117 aaKnown RBP9□□□□□ -0.97
TPM1-216ENST00000558910 RELQ04864 619 aaPredicted RBP9□□□□□ -0.97
TPM1-216ENST00000558910 TIGITQ495A1 244 aa9□□□□□ -0.97
TPM1-216ENST00000558910 FAM219AQ8IW50 185 aa9□□□□□ -0.97
TPM1-216ENST00000558910 LGI3Q8N145 548 aa9□□□□□ -0.97
TPM1-216ENST00000558910 ZNF114Q8NC26 417 aa9□□□□□ -0.97
TPM1-216ENST00000558910 SRRQ9GZT4 340 aa9□□□□□ -0.97
TPM1-216ENST00000558910 FNDC4Q9H6D8 234 aaPredicted RBP9□□□□□ -0.97
TPM1-216ENST00000558910 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
TPM1-216ENST00000558910 TMEM56-RWDD3S4R434 201 aa9□□□□□ -0.97
TPM1-216ENST00000558910 IFNA10P01566 189 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
TPM1-216ENST00000558910 HOXB5P09067 269 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 RPL11P62913 178 aaKnown RBP8.99□□□□□ -0.97
TPM1-216ENST00000558910 ANKRD55Q3KP44 614 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 ZFAND6Q6FIF0 208 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 LAMTOR1Q6IAA8 161 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 TOMM20LQ6UXN7 152 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 TMEM116Q8NCL8 245 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 ACY3Q96HD9 319 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 RNF2Q99496 336 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 RBKSQ9H477 322 aa8.99□□□□□ -0.97
TPM1-216ENST00000558910 PUS1Q9Y606 427 aaKnown RBP eCLIP8.99□□□□□ -0.97
TPM1-216ENST00000558910 DNAH7Q8WXX0 4024 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 TRAV14DV4A0A0A6YYC5 116 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 TMEM50AO95807 157 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 C8orf88P0DMB2 117 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
TPM1-216ENST00000558910 RND2P52198 227 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 ELLP55199 621 aaPredicted RBP8.98□□□□□ -0.97
TPM1-216ENST00000558910 PPP1R1AQ13522 171 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 SMCO1Q147U7 214 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 SLC24A4Q8NFF2 622 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 ST8SIA2Q92186 375 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 GALNT14Q96FL9 552 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 ZNF414Q96IQ9 312 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 TXN2Q99757 166 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 MAGT1Q9H0U3 335 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 HIPK2Q9H2X6 1198 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 GAR1Q9NY12 217 aaKnown RBP8.98□□□□□ -0.97
TPM1-216ENST00000558910 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
TPM1-216ENST00000558910 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
TPM1-216ENST00000558910 A0A0B4J2A0 478 aa8.97□□□□□ -0.97
TPM1-216ENST00000558910 A0A1B0GU03 582 aa8.97□□□□□ -0.97
TPM1-216ENST00000558910 ZNF701M0R085 212 aaPredicted RBP8.97□□□□□ -0.97
TPM1-216ENST00000558910 CHEK1O14757 476 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms