RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 J3QR06 171 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 HMGB3O15347 200 aaKnown RBP6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PDE6DO43924 150 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CXorf1O96002 111 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CA2P00918 260 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OPN1MWP04001 364 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OPN1MW2P0DN77 364 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OPN1MW3P0DN78 364 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CCL3L1P16619 93 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CD81P60033 236 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PRCDQ00LT1 54 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 KIAA0141Q14154 515 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-211ENST00000558890 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 HLA-DRB5Q30154 266 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OXLD1Q5BKU9 147 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 FAM120AOSQ5T036 256 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CCDC144NLQ6NUI1 221 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 TREML4Q6UXN2 200 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 VMO1Q7Z5L0 202 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PDPNQ86YL7 162 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 ABHD12Q8N2K0 398 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OR10X1Q8NGY0 326 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 OR4A5Q8NH83 315 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 VSTM2AQ8TAG5 236 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 HARBI1Q96MB7 349 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 MGST2Q99735 147 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PCGF1Q9BSM1 259 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PARLQ9H300 379 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 PRDM13Q9H4Q3 707 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
LRRC28-211ENST00000558890 CDC42EP3Q9UKI2 254 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 IGHV1-69DA0A0B4J2H0 117 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 A0A1W2PN81 502 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 C11orf94C9JXX5 98 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 PRSS46E5RG02 174 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 H7BYZ3 331 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 AP4M1O00189 453 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 UBE2CO00762 179 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 PAGE4O60829 102 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 EIF3GO75821 320 aaKnown RBP eCLIP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 MMP23AO75900 390 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 VENTXO95231 258 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 IGHV1-69P01742 117 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 IL6RP08887 468 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 CT45A6P0DMU7 189 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 CT45A5P0DMU8 189 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 CT45A7P0DMV0 189 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 HTR1DP28221 377 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 CHRNA7P36544 502 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 RND2P52198 227 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 B2MP61769 119 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 SNRPEP62304 92 aaKnown RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 ARF6P62330 175 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 RHOBP62745 196 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 ELOBQ15370 118 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 BSXQ3C1V8 233 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 TMEM177Q53S58 311 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 KLF17Q5JT82 389 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 HCP5Q6MZN7 132 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 MRPL41Q8IXM3 137 aaKnown RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 Q8WTZ3 238 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 ST6GALNAC6Q969X2 333 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 FLYWCH2Q96CP2 140 aaKnown RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 SLC35E1Q96K37 410 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 FAM210BQ96KR6 192 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 MRPL20Q9BYC9 149 aaKnown RBP6.16□□□□□ -1.42
LRRC28-211ENST00000558890 COMMD5Q9GZQ3 224 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 URGCP-MRPS24S4R325 110 aa6.16□□□□□ -1.42
LRRC28-211ENST00000558890 TRRAPQ9Y4A5 3859 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 TGIF2-C20orf24A0A0A6YYL0 155 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 CENPVL3A0A0U1RRI6 287 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF98A6NK75 572 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 H0YJW9 148 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 LY6LH3BQJ8 138 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 BUB1B-PAK6H3BSN5 160 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 NPFFO15130 113 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 CXCL1P09341 107 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 STAG3L2P0CL84 134 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 STAG3L3P0CL85 134 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-211ENST00000558890 RPL29P47914 159 aaKnown RBP6.15□□□□□ -1.42
LRRC28-211ENST00000558890 MEOX2P50222 304 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 RIPPLY3P57055 190 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
LRRC28-211ENST00000558890 ERHP84090 104 aaKnown RBP6.15□□□□□ -1.42
LRRC28-211ENST00000558890 FABP9Q0Z7S8 132 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 VMA21Q3ZAQ7 101 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 C2orf83Q53S99 150 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 UTF1Q5T230 341 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 CST9LP1Q5W188 147 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 MIC13Q5XKP0 118 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF343Q6P1L6 599 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 KCNIP4Q6PIL6 250 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms