RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 A0A1B0GU03 582 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 MARCH11A6NNE9 402 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 H3BMM0 161 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 CIB2O75838 187 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 NPPCP23582 126 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 GNRHRP30968 328 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 P2RY1P47900 373 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 CCL18P55774 89 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 DAD1P61803 113 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 CATR1Q13166 79 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 DHRS2Q13268 280 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 KCTD21Q4G0X4 260 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 HES5Q5TA89 166 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 OGFRL1Q5TC84 451 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM91Q6ZNR0 172 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 AHSA2Q719I0 299 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 MOB3AQ96BX8 217 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 KRTAP1-5Q9BYS1 174 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 PTTG2Q9NZH5 202 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 PSORS1C1Q9UIG5 152 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 YTHDF2Q9Y5A9 579 aaKnown RBP4.72□□□□□ -1.65
LRRC28-207ENST00000558500 OR51B2Q9Y5P1 312 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 V9GY05 133 aa4.72□□□□□ -1.65
LRRC28-207ENST00000558500 RPS10-NUDT3A0A1W2PQS6 291 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 METTL21EPA6NDL7 271 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 HELTA6NFD8 242 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 J3KRW8 73 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ARL6IP5O75915 188 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 NUDT3O95989 172 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 SMR3BP02814 79 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-207ENST00000558500 PLA2G1BP04054 148 aaKnown RBP4.71□□□□□ -1.66
LRRC28-207ENST00000558500 CRYBB3P26998 211 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 NPBWR1P48145 328 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ALDH3B2P48448 385 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ERVK-16P61578 105 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 DLK1P80370 383 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ARL6IP1Q15041 203 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 TTC32Q5I0X7 151 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ZFP1Q6P2D0 407 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 TMEM203Q969S6 136 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 C17orf77Q96MU5 243 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 METTL26Q96S19 204 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 ANXA10Q9UJ72 324 aa4.71□□□□□ -1.66
LRRC28-207ENST00000558500 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 DBX1A6NMT0 343 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 SNAPC5O75971 98 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 TMEM50AO95807 157 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 KRASP01116 189 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 HBE1P02100 147 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 HLA-DRB4P13762 266 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 CALRP27797 417 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 FCGR2CP31995 323 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 HOXA1P49639 335 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 EIF2B2P49770 351 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 RASSF2P50749 326 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 PPP5CP53041 499 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 SNRPD3P62318 126 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 AADACL3Q5VUY0 350 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 HACD4Q5VWC8 232 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 LAIR2Q6ISS4 152 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF818PQ6ZRF7 136 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 SSX7Q7RTT5 188 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 CADM3Q8N126 398 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 OR13F1Q8NGS4 319 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 OR51H1Q8NH63 302 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 NUDCD2Q8WVJ2 157 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 PINX1Q96BK5 328 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF503Q96F45 646 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 NARS2Q96I59 477 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 MND1Q9BWT6 205 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 SLC5A7Q9GZV3 580 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 Q9H3A6 140 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 Q9H8V8 135 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 PLCXD1Q9NUJ7 323 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 LSM2Q9Y333 95 aaKnown RBP4.7□□□□□ -1.66
LRRC28-207ENST00000558500 HLA-DRB4X5D2U9 266 aa4.7□□□□□ -1.66
LRRC28-207ENST00000558500 A0A1W2PPQ1 181 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-207ENST00000558500 FAM90A26D6RGX4 464 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 SSX5O60225 188 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 PPYP01298 95 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 PTHLHP12272 177 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
LRRC28-207ENST00000558500 LPAR6P43657 344 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 AP2S1P53680 142 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-207ENST00000558500 UCP3P55916 312 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 FXYD7P58549 80 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 ARPC4P59998 168 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 KRTAP10-1P60331 282 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 RPS25P62851 125 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms