RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
AP4E1-202ENST00000558439 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
AP4E1-202ENST00000558439 GZMBP10144 247 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
AP4E1-202ENST00000558439 RAB1CQ92928 201 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 PPIAL4GP0DN37 164 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 RPL11P62913 178 aaKnown RBP12.67□□□□□ -0.38
AP4E1-202ENST00000558439 ASPHD1Q5U4P2 390 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 PNKDQ8N490 385 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
AP4E1-202ENST00000558439 NBEAP1P0C6P0 100 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 TMEM177Q53S58 311 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
AP4E1-202ENST00000558439 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
AP4E1-202ENST00000558439 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
AP4E1-202ENST00000558439 SSBP4Q9BWG4 385 aaPredicted RBP12.67□□□□□ -0.38
AP4E1-202ENST00000558439 F2RL2O00254 374 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ZNF664Q8N3J9 261 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 KIR3DL3Q8N743 410 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 AMY1AP04745 511 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
AP4E1-202ENST00000558439 TMEM200BQ69YZ2 307 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 VPS13AQ96RL7 3174 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 CD99P14209 185 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 TCTAP57738 103 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 PRSS8Q16651 343 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ZCCHC14Q8WYQ9 949 aaKnown RBP12.66□□□□□ -0.38
AP4E1-202ENST00000558439 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 RAB1BQ9H0U4 201 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ZNF785A8K8V0 405 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 A8MWL6 223 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ZNF600Q6ZNG1 722 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 GOLT1AQ6ZVE7 132 aa12.66□□□□□ -0.38
AP4E1-202ENST00000558439 ISLRO14498 428 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 SPATA45Q537H7 98 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 GBGT1Q8N5D6 347 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 C14orf144Q96I85 54 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 PEX7O00628 323 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 FOXL1Q12952 345 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 MUC15Q8N387 334 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
AP4E1-202ENST00000558439 GSX1Q9H4S2 264 aaPredicted RBP12.65□□□□□ -0.38
AP4E1-202ENST00000558439 NEUROG1Q92886 237 aa12.65□□□□□ -0.38
AP4E1-202ENST00000558439 IGHV3OR16-8A0A075B7F1 116 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 NPPCP23582 126 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 FCGR2BP31994 310 aaPredicted RBP12.64□□□□□ -0.39
AP4E1-202ENST00000558439 LGALS7P47929 136 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 CYB5R2Q6BCY4 276 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 ZNF788Q6ZQV5 615 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 CACNG8Q8WXS5 425 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 ATRXP46100 2492 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 IGLV1-44P01699 117 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 CEACAM3P40198 252 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 MEF2CQ06413 473 aaPredicted RBP12.64□□□□□ -0.39
AP4E1-202ENST00000558439 VAMP3Q15836 100 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 NDUFAF3Q9BU61 184 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 IGF2RP11717 2491 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 CELSR3Q9NYQ7 3312 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 MAS1LP35410 378 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 CTAG1AP78358 180 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 NEU1Q99519 415 aa12.64□□□□□ -0.39
AP4E1-202ENST00000558439 PPOXP50336 477 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 LOXL3P58215 753 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 MSMPQ1L6U9 139 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 RNASE6Q93091 150 aaKnown RBP12.63□□□□□ -0.39
AP4E1-202ENST00000558439 CLEC7AQ9BXN2 247 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
AP4E1-202ENST00000558439 TCF24Q7RTU0 167 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 Q9UFV3 132 aa12.63□□□□□ -0.39
AP4E1-202ENST00000558439 K7EM74 188 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 DKK4Q9UBT3 224 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 REV3LO60673 3130 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 TBR1Q16650 682 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 FAM162BQ5T6X4 162 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 RBM14Q96PK6 669 aaKnown RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 RPLP1P05386 114 aaKnown RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 ADIPOQQ15848 244 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 UTF1Q5T230 341 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms