RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 ZNF714Q96N38 554 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 GNB4Q9HAV0 340 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 BET1LQ9NYM9 111 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 OR5G3P0C626 314 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 SELENOTP62341 195 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 PATE2Q6UY27 113 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 OR5AU1Q8NGC0 362 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 OR10X1Q8NGY0 326 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 FLYWCH2Q96CP2 140 aaKnown RBP10.42□□□□□ -0.74
LDLR-207ENST00000558013 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 CTSZQ9UBR2 303 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 MED13LQ71F56 2210 aa10.42□□□□□ -0.74
LDLR-207ENST00000558013 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 SLC25A17O43808 307 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 UBE2L3P68036 154 aaKnown RBP10.41□□□□□ -0.74
LDLR-207ENST00000558013 HCP5Q6MZN7 132 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 TMEM108Q6UXF1 575 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 OR5B3Q8NH48 314 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 FAM57AQ8TBR7 257 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 SLC35E1Q96K37 410 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
LDLR-207ENST00000558013 SAP30LQ9HAJ7 183 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 RAB9BQ9NP90 201 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 TMEM167BQ9NRX6 74 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 TMEM106BQ9NUM4 274 aa10.41□□□□□ -0.74
LDLR-207ENST00000558013 C16orf97H3BN30 126 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 H3BTX0 84 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 C8orf88P0DMB2 117 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 OR5AN1Q8NGI8 311 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 VN1R17PQ8TDU5 208 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 MOSP00540 346 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 GNG5P63218 68 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 TIGITQ495A1 244 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 IGF2RP11717 2491 aa10.4□□□□□ -0.74
LDLR-207ENST00000558013 ENSAO43768 121 aaKnown RBP10.4□□□□□ -0.75
LDLR-207ENST00000558013 APOA2P02652 100 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 CNTFRP26992 372 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 TAS2R60P59551 318 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 PRR30Q53SZ7 412 aaPredicted RBP10.4□□□□□ -0.75
LDLR-207ENST00000558013 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.75
LDLR-207ENST00000558013 ABHD17AQ96GS6 310 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 GSX1Q9H4S2 264 aaPredicted RBP10.4□□□□□ -0.75
LDLR-207ENST00000558013 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 PAM16Q9Y3D7 125 aa10.4□□□□□ -0.75
LDLR-207ENST00000558013 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 PPIAL4EA0A075B759 164 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 NKX6-3A6NJ46 265 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 PPIAL4DF5H284 164 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 LYNX1G3V0Z9 82 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 TMEM178BH3BS89 294 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 PPIAL4FP0DN26 164 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 LYNX1P0DP58 116 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 TNFRSF1AP19438 455 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 OSR1Q8TAX0 266 aaPredicted RBP10.39□□□□□ -0.75
LDLR-207ENST00000558013 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 PPIAL4AQ9Y536 164 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 HRNRQ86YZ3 2850 aaPredicted RBP10.39□□□□□ -0.75
LDLR-207ENST00000558013 CX3CL1P78423 397 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
LDLR-207ENST00000558013 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 IGFBPL1Q8WX77 278 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 COL12A1Q99715 3063 aa10.39□□□□□ -0.75
LDLR-207ENST00000558013 ANKHD1Q8IWZ3 2542 aaKnown RBP10.39□□□□□ -0.75
LDLR-207ENST00000558013 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 DLL1O00548 723 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 RANP62826 216 aaKnown RBP10.38□□□□□ -0.75
LDLR-207ENST00000558013 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 NUP37Q8NFH4 326 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 FBXL7Q9UJT9 491 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 A0A1W2PPI3 338 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 ISLRO14498 428 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 ORM2P19652 201 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 PPOXP50336 477 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 MRGPRG-AS1Q2M3A8 158 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 FAM19A2Q8N3H0 131 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 BLNKQ8WV28 456 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 ARHGAP32A7KAX9 2087 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 CORTO00230 105 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 CRYABP02511 175 aaKnown RBP10.38□□□□□ -0.75
LDLR-207ENST00000558013 MFAP2P55001 183 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 TPPP2P59282 170 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 TAS2R45P59539 299 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 OR4C13Q8NGP0 309 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 RPH3ALQ9UNE2 315 aa10.38□□□□□ -0.75
LDLR-207ENST00000558013 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms