RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 OPRK1P41145 380 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 FGF8P55075 233 aaPredicted RBP5.83□□□□□ -1.48
SPG11-204ENST00000557866 RPL11P62913 178 aaKnown RBP5.83□□□□□ -1.48
SPG11-204ENST00000557866 FXYD3Q14802 87 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 PLGLAQ15195 96 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 C10orf91Q5T1B1 145 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 ASPHD1Q5U4P2 390 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 FAM122CQ6P4D5 195 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 ATRAIDQ6UW56 229 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 LCN15Q6UWW0 184 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 BRD3OSQ6XYD6 125 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 SLC16A13Q7RTY0 426 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 TMEM144Q7Z5S9 345 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 LRRC75A-AS1Q8N1F1 130 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 ZNF709Q8N972 641 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 Q8N9W7 124 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 OR10G4Q8NGN3 311 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 OR10G9Q8NGN4 311 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 OR10G7Q8NGN6 311 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 PIFOQ8TCI5 191 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 RNASEH2CQ8TDP1 164 aaKnown RBP5.83□□□□□ -1.48
SPG11-204ENST00000557866 SSMEM1Q8WWF3 244 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 CACNG8Q8WXS5 425 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 SLC25A22Q9H936 323 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 HIF1ANQ9NWT6 349 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 F11RQ9Y624 299 aaKnown RBP5.83□□□□□ -1.48
SPG11-204ENST00000557866 PXMP4Q9Y6I8 212 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 CELSR2Q9HCU4 2923 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 PTPN13Q12923 2485 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 ABCA2Q9BZC7 2435 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 IGKV1D-37A0A075B6S9 117 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 TRAV20A0A0B4J274 112 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 TRAV40A0A0B4J280 105 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 A0A0U1RQK1 487 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 MAP1LC3B2A6NCE7 125 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 BTBD17A6NE02 478 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 SEC14L6B5MCN3 397 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 C17orf112F2Z3M2 114 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 HMGB3O15347 200 aaKnown RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 HBE1P02100 147 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 MBP02144 154 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 CRYGCP07315 174 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 FAM106CPP0CH98 169 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 EGR2P11161 476 aaPredicted RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 CTRB1P17538 263 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 M6PRP20645 277 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 OR10J1P30954 320 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 RPL29P47914 159 aaKnown RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 SUB1P53999 127 aaKnown RBP eCLIP5.82□□□□□ -1.48
SPG11-204ENST00000557866 CX3CL1P78423 397 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 LOXL1Q08397 574 aaPredicted RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 ICAM4Q14773 271 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 ACOT6Q3I5F7 207 aaPredicted RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 CTRB2Q6GPI1 263 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 TEPPQ6URK8 271 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 STPG3Q8N7X2 389 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 LFNGQ8NES3 379 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 OR1P1Q8NH06 330 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 NPIPB3Q92617 1050 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 RAB24Q969Q5 203 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 MBD6Q96DN6 1003 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 NARS2Q96I59 477 aaKnown RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 SRSF8Q9BRL6 282 aaKnown RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 FAM103A1Q9BTL3 118 aaKnown RBP5.82□□□□□ -1.48
SPG11-204ENST00000557866 MAP1LC3BQ9GZQ8 125 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 MEGF9Q9H1U4 602 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 SLC39A9Q9NUM3 307 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 KIAA1456Q9P272 454 aa5.82□□□□□ -1.48
SPG11-204ENST00000557866 POLQO75417 2590 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 IGHV3-21A0A0B4J1V1 117 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 IGHV7-81A0A0B4J1V7 117 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 CTXND1A0A1B0GTU2 59 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 LOC102723971A0A1B0GUV8 181 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 RBFOX3A6NFN3 312 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 NCBP2LA6PVI3 153 aaKnown RBP5.81□□□□□ -1.48
SPG11-204ENST00000557866 I3L2K1 104 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 CNIH1O95406 144 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 SFTA3P0C7M3 94 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 IGHV4-31P0DP07 118 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 BRS3P32247 399 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 B2MP61769 119 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 PEA15Q15121 130 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 GUCA2BQ16661 112 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 HAGHQ16775 308 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 ZNF506Q5JVG8 444 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 Q5PR19 223 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 SPATA31B1PQ5VZV4 182 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 ZNF562Q6V9R5 426 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 CCDC28AQ8IWP9 274 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 THAP8Q8NA92 274 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 ACY3Q96HD9 319 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 SLC35E1Q96K37 410 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 HSPB9Q9BQS6 159 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 SLC25A33Q9BSK2 321 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 ACTR3CQ9C0K3 210 aaPredicted RBP5.81□□□□□ -1.48
SPG11-204ENST00000557866 TMPRSS5Q9H3S3 457 aa5.81□□□□□ -1.48
SPG11-204ENST00000557866 GNG13Q9P2W3 67 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms