RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LHFPL1Q86WI0 220 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 HIST3H2BBQ8N257 126 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 TERB2Q8NHR7 220 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 CANT1Q8WVQ1 401 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 ADAT3Q96EY9 351 aaPredicted RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 YPEL2Q96QA6 119 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 IMMP2LQ96T52 175 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 GINS4Q9BRT9 223 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 RASL12Q9NYN1 266 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 RBM7Q9Y580 266 aaKnown RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 TIMM9Q9Y5J7 89 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 R4GN34 69 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 MROH2BQ7Z745 1585 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 REREQ9P2R6 1566 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 NUP210LQ5VU65 1888 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 KIF26AQ9ULI4 1882 aaPredicted RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 CACNA1DQ01668 2161 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 EML6Q6ZMW3 1958 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 BORCS7-ASMTA0A0B4J1R7 106 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 TRGV5A0A0B4J1U4 118 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 H3BT86 120 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 CPSF4O95639 269 aaKnown RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 ZNF728P0DKX0 622 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 BCL2P10415 239 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 ZNF14P17017 642 aaPredicted RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 RPL28P46779 137 aaKnown RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 EIF2B2P49770 351 aaKnown RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 RTL8BQ17RB0 113 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 DEFB115Q30KQ5 88 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 CCDC153Q494R4 210 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 IFT20Q8IY31 132 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 ZNF561Q8N587 486 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 OR52R1Q8NGF1 315 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 OR4D11Q8NGI4 311 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 PPTC7Q8NI37 304 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 GPX7Q96SL4 187 aaPredicted RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 NUP210Q8TEM1 1887 aaPredicted RBP2.22□□□□□ -2.05
TDP1-217ENST00000557782 ADGBQ8N7X0 1667 aa2.22□□□□□ -2.05
TDP1-217ENST00000557782 XIRP1Q702N8 1843 aaKnown RBP2.21□□□□□ -2.05
TDP1-217ENST00000557782 TLCD2A6NGC4 264 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 C11orf86A6NJI1 115 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TMEM212A6NML5 194 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 J3KT08 172 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 GNRH2O43555 120 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TCL1BO95988 128 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TRGC2P03986 189 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 DBIP07108 87 aaKnown RBP2.21□□□□□ -2.06
TDP1-217ENST00000557782 BPGMP07738 259 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 EVX1P49640 407 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 POLR2HP52434 150 aaKnown RBP2.21□□□□□ -2.06
TDP1-217ENST00000557782 PLCXD2Q0VAA5 305 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 KISS1Q15726 138 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 BRMS1LQ5PSV4 323 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 C1orf140Q5VVS0 124 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 AGTRAPQ6RW13 159 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 LYZL1Q6UWQ5 148 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 Q6ZS52 159 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 MSRB3Q8IXL7 192 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 OR5A1Q8NGJ0 315 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 OR51T1Q8NGJ9 327 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 WFDC5Q8TCV5 224 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TMEM106AQ96A25 262 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 BORCS8Q96FH0 119 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TEX37Q96LM6 180 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TSC22D3Q99576 134 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TMEM126AQ9H061 195 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TMEM133Q9H2Q1 129 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 MRPL16Q9NX20 251 aaKnown RBP2.21□□□□□ -2.06
TDP1-217ENST00000557782 MINOS1-NBL1R4GNA1 71 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 HSPE1-MOB4S4R3N1 261 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 TOP2AP11388 1531 aaKnown RBP2.21□□□□□ -2.06
TDP1-217ENST00000557782 TOPBP1Q92547 1522 aa2.21□□□□□ -2.06
TDP1-217ENST00000557782 SMARCA4P51532 1647 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 COL16A1Q07092 1604 aaPredicted RBP2.2□□□□□ -2.06
TDP1-217ENST00000557782 ARAP1Q96P48 1450 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 SMARCA2P51531 1590 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 ABCC8Q09428 1581 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 PEG3Q9GZU2 1588 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 SCN9AQ15858 1988 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 SLX4Q8IY92 1834 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 TRGV10A0A0A0MS01 117 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 A0A0D9SEW6 157 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 A0A0D9SG52 128 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 A0A1B0GX51 115 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 M0R378 163 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 LGALS3P17931 250 aaKnown RBP2.2□□□□□ -2.06
TDP1-217ENST00000557782 RPL7P18124 248 aaKnown RBP2.2□□□□□ -2.06
TDP1-217ENST00000557782 S100A11P31949 105 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 CKS1BP61024 79 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 UBE2BP63146 152 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 PSPHP78330 225 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 MOBPQ13875 183 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 SLC35E3Q7Z769 313 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 KRTAP11-1Q8IUC1 163 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 RPP25LQ8N5L8 163 aaKnown RBP2.2□□□□□ -2.06
TDP1-217ENST00000557782 SIGLECL1Q8N7X8 197 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms