RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CLN5O75503 358 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 IFNA17P01571 189 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 PI3P19957 117 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 ETV6P41212 452 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 SUB1P53999 127 aaKnown RBP eCLIP11.57□□□□□ -0.56
SCFD1-224ENST00000557713 TMEM41BQ5BJD5 291 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 LHFPL1Q86WI0 220 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-224ENST00000557713 ZNF705EA8MWA4 302 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-224ENST00000557713 RPL5P46777 297 aaKnown RBP11.56□□□□□ -0.56
SCFD1-224ENST00000557713 PPP5CP53041 499 aa11.56□□□□□ -0.56
SCFD1-224ENST00000557713 PIGPP57054 158 aa11.56□□□□□ -0.56
SCFD1-224ENST00000557713 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-224ENST00000557713 OR4X1Q8NH49 305 aa11.56□□□□□ -0.56
SCFD1-224ENST00000557713 C3orf85A0A1B0GTC6 90 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 HPGDSO60760 199 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 ATG12O94817 140 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 SPP1P10451 314 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 MIFP14174 115 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 PGAM2P15259 253 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 C4BPBP20851 252 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 HLA-DMBP28068 263 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 P2RY1P47900 373 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 AKR1C2P52895 323 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 NCS1P62166 190 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 BSXQ3C1V8 233 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 DCANP1Q8TF63 244 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 METTL26Q96S19 204 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 KLK11Q9UBX7 282 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 X6R8D5 127 aa11.55□□□□□ -0.56
SCFD1-224ENST00000557713 KIAA1109Q2LD37 5005 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 A0A087WXM4 84 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 TMEM230Q96A57 120 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 PDCD10Q9BUL8 212 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 U3KQE9 123 aa11.54□□□□□ -0.56
SCFD1-224ENST00000557713 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-224ENST00000557713 A0A0G2JRQ6 117 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 CD3DP04234 171 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 OPRK1P41145 380 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 HOXA1P49639 335 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-224ENST00000557713 VBP1P61758 197 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 SP6Q3SY56 376 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 TIGITQ495A1 244 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
SCFD1-224ENST00000557713 Q6ZRM9 215 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 Q6ZTC4 211 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 ARRDC1Q8N5I2 433 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 VCX3AQ9NNX9 186 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 FAT2Q9NYQ8 4349 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 DNAH2Q9P225 4427 aa11.53□□□□□ -0.56
SCFD1-224ENST00000557713 DNAH17Q9UFH2 4485 aa11.52□□□□□ -0.56
SCFD1-224ENST00000557713 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 UCP1P25874 307 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 OR52I2Q8NH67 350 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 ENY2Q9NPA8 101 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 CLEC5AQ9NY25 188 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 MTFP1Q9UDX5 166 aa11.52□□□□□ -0.57
SCFD1-224ENST00000557713 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 SCGB2A1O75556 95 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 SPCS3P61009 180 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 DHRS2Q13268 280 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 RNASE12Q5GAN4 147 aaKnown RBP11.51□□□□□ -0.57
SCFD1-224ENST00000557713 C16orf54Q6UWD8 224 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 ZFAND1Q8TCF1 268 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 RRNAD1Q96FB5 475 aaKnown RBP11.51□□□□□ -0.57
SCFD1-224ENST00000557713 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
SCFD1-224ENST00000557713 COPZ2Q9P299 210 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 TBC1D24Q9ULP9 559 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 AGRNO00468 2067 aa11.51□□□□□ -0.57
SCFD1-224ENST00000557713 HELTA6NFD8 242 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 B3GALNT1O75752 331 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 TBPP20226 339 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 HTR2BP41595 481 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 RORCP51449 518 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 OR13C8Q8NGS7 320 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 RNF126Q9BV68 326 aa11.5□□□□□ -0.57
SCFD1-224ENST00000557713 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 FAM25AB3EWG3 89 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 FAM25CB3EWG5 89 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms