RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CXorf58Q96LI9 332 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 HEYLQ9NQ87 328 aaPredicted RBP12.63□□□□□ -0.39
NEK9-211ENST00000557673 PEF1Q9UBV8 284 aaKnown RBP12.63□□□□□ -0.39
NEK9-211ENST00000557673 S4R3C0 116 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 HTR2BP41595 481 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 IAH1Q2TAA2 248 aaPredicted RBP12.62□□□□□ -0.39
NEK9-211ENST00000557673 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 ADAMTSL5Q6ZMM2 481 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 VN1R17PQ8TDU5 208 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 TUBA4BQ9H853 241 aa12.62□□□□□ -0.39
NEK9-211ENST00000557673 C7orf66A4D0T2 115 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 BMPR1BO00238 502 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 SYNJ2BPP57105 145 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 KLF5Q13887 457 aaPredicted RBP12.61□□□□□ -0.39
NEK9-211ENST00000557673 HAGHQ16775 308 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 RGS21Q2M5E4 152 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 GTSCR1Q86UQ5 136 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 ZBTB8BQ8NAP8 495 aaPredicted RBP12.61□□□□□ -0.39
NEK9-211ENST00000557673 UXS1Q8NBZ7 420 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 STARD9Q9P2P6 4700 aa12.61□□□□□ -0.39
NEK9-211ENST00000557673 TRBV7-1A0A0A6YYK4 115 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 I3L2K1 104 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 CORTO00230 105 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 MED6O75586 246 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 NPY1RP25929 384 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 SUB1P53999 127 aaKnown RBP eCLIP12.6□□□□□ -0.39
NEK9-211ENST00000557673 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 HIPK2Q9H2X6 1198 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
NEK9-211ENST00000557673 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 F8W735 103 aaPredicted RBP12.59□□□□□ -0.39
NEK9-211ENST00000557673 SYNGR2O43760 224 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 MT-CO2P00403 227 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 IAPPP10997 89 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 GPR183P32249 361 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
NEK9-211ENST00000557673 ID3Q02535 119 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 CLEC19AQ6UXS0 136 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 IL34Q6ZMJ4 242 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 SCARB1Q8WTV0 552 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 PINX1Q96BK5 328 aaKnown RBP12.59□□□□□ -0.39
NEK9-211ENST00000557673 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
NEK9-211ENST00000557673 FAM25EA8MYX2 175 aa12.58□□□□□ -0.4
NEK9-211ENST00000557673 LCN12Q6JVE5 192 aa12.58□□□□□ -0.4
NEK9-211ENST00000557673 CIB3Q96Q77 187 aaPredicted RBP12.58□□□□□ -0.4
NEK9-211ENST00000557673 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
NEK9-211ENST00000557673 U3KQ87 197 aa12.58□□□□□ -0.4
NEK9-211ENST00000557673 C5orf51A6NDU8 294 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 C15orf62A8K5M9 175 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 GOSR2O14653 212 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 SSSCA1O60232 199 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 IFNA10P01566 189 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 FCGR2BP31994 310 aaPredicted RBP12.57□□□□□ -0.4
NEK9-211ENST00000557673 ARL3P36405 182 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 POLR2GP62487 172 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEK9-211ENST00000557673 OXA1LQ15070 435 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
NEK9-211ENST00000557673 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
NEK9-211ENST00000557673 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 GSKIPQ9P0R6 139 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
NEK9-211ENST00000557673 WRBO00258 174 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 TGOLN2O43493 480 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
NEK9-211ENST00000557673 IGHV3-48P01763 117 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
NEK9-211ENST00000557673 CSN3P07498 182 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 OPRK1P41145 380 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 NOXA1Q86UR1 476 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
NEK9-211ENST00000557673 C2orf50Q96LR7 162 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 KRTAP17-1Q9BYP8 105 aa12.56□□□□□ -0.4
NEK9-211ENST00000557673 OR2T8A6NH00 312 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 H3BP45 60 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 SSNA1O43805 119 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 CLEC3BP05452 202 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
NEK9-211ENST00000557673 Q56UQ5 140 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 ZC4H2Q9NQZ6 224 aa12.55□□□□□ -0.4
NEK9-211ENST00000557673 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 TMEM50AO95807 157 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 MFAP4P55083 255 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 IL15RAQ13261 267 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 OR2K2Q8NGT1 345 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 TXN2Q99757 166 aa12.54□□□□□ -0.4
NEK9-211ENST00000557673 MRPL36Q9P0J6 103 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms