RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OR1L4Q8NGR5 311 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM222BQ8WU58 562 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 SNRNP40Q96DI7 357 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 OR8B2Q96RD0 313 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 IGHV2-26A0A0B4J1V2 119 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 OR2J3O76001 311 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 HIST1H1EP10412 219 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 PTTG1IPP53801 180 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 UBE2G1P62253 170 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 C10orf113Q5VZT2 155 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 ALKBH2Q6NS38 261 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 DUX4L9Q6RFH8 374 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 ALKBH7Q9BT30 221 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 TNFRSF19Q9NS68 423 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 PYYP10082 97 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 CD59P13987 128 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 BPIFB3P59826 476 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 Q56UQ5 140 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 EBLN2Q6P2I7 272 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 DHRS13Q6UX07 377 aa9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-211ENST00000557658 TECTAO75443 2155 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 TM4SF5O14894 197 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 RPL8P62917 257 aaKnown RBP9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 ASPHD1Q5U4P2 390 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 PRR27Q6MZM9 219 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 ATP5L2Q7Z4Y8 100 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 LINC00574Q9H8X3 128 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 NDUFA4L2Q9NRX3 87 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 M0R1B8 84 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 APOA2P02652 100 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 GLRXP35754 106 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 PCP4P48539 62 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM162BQ5T6X4 162 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 VHLLQ6RSH7 139 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF738Q8NE65 137 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 GAFA1Q96PS6 74 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF430Q9H8G1 570 aaPredicted RBP9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 ASCL3Q9NQ33 180 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
VIPAS39-211ENST00000557658 RAI1Q7Z5J4 1906 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 CADP27708 2225 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 H0YJW9 148 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 CCL25O15444 150 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 TOMM40O96008 361 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 GATA4P43694 442 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 GPR6P46095 362 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 CAMPP49913 170 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 HES3Q5TGS1 186 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 DEFB108BQ8NET1 73 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 RND1Q92730 232 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 HARBI1Q96MB7 349 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 DKK4Q9UBT3 224 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 A0A1W2PN81 502 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 UNQ5815/PRO19632Q6UWF5 114 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 CCL13Q99616 98 aa9.58□□□□□ -0.88
VIPAS39-211ENST00000557658 IGHV1-69-2A0A0G2JMI3 117 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 TCRBV4S1A1TA0A5B7 111 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 IGLL1P15814 213 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 CCL11P51671 97 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 UBE2V1Q13404 147 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 FAM216BQ8N7L0 139 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 ZNF596Q8TC21 504 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 FXYD5Q96DB9 178 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 PRO3102Q9H379 93 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 PRRC2CQ9Y520 2896 aaKnown RBP9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 hADV38S2A0JD32 116 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 NKX6-3A6NJ46 265 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 SSBP2P81877 361 aaPredicted RBP9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 PATE2Q6UY27 113 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 ZNF788Q6ZQV5 615 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 MRPL20Q9BYC9 149 aaKnown RBP9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 NBEAQ8NFP9 2946 aa9.57□□□□□ -0.88
VIPAS39-211ENST00000557658 IGLV3-9A0A075B6K5 115 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 A0A1B0GXF2 115 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 IGLC7A0M8Q6 106 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 CA7P43166 264 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 SUB1P53999 127 aaKnown RBP eCLIP9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 TNFAIP6P98066 277 aaPredicted RBP9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 PDPNQ86YL7 162 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 MUC15Q8N387 334 aa9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 RBMXL3Q8N7X1 1067 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-211ENST00000557658 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms