RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ZNF257Q9Y2Q1 563 aa10.27□□□□□ -0.77
APEX1-216ENST00000557159 NBEAQ8NFP9 2946 aa10.27□□□□□ -0.77
APEX1-216ENST00000557159 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 CACNA1DQ01668 2161 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 ZNHIT1O43257 154 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SPINK4O60575 86 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 CEACAM4O75871 244 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SSTR5P35346 364 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 TCL1AP56279 114 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 FAM120AOSQ5T036 256 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 FAM53AQ6NSI3 398 aaPredicted RBP10.26□□□□□ -0.77
APEX1-216ENST00000557159 SLC25A34Q6PIV7 304 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 Q6ZVH6 145 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 PLEKHA3Q9HB20 300 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 OR4C46A6NHA9 309 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 F2RL2O00254 374 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 CEBPDP49716 269 aaPredicted RBP10.26□□□□□ -0.77
APEX1-216ENST00000557159 CCL11P51671 97 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 ARF6P62330 175 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SLC35B1P78383 322 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SMIM21Q3B7S5 101 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 CT83Q5H943 113 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 Q6ZR03 302 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 CXXC4Q9H2H0 198 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 ENY2Q9NPA8 101 aa10.26□□□□□ -0.77
APEX1-216ENST00000557159 SYS1-DBNDD2H3BUS1 97 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 M0R1X1 148 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 IGHG3P01860 377 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 HIST1H1EP10412 219 aaKnown RBP10.25□□□□□ -0.77
APEX1-216ENST00000557159 MFAP2P55001 183 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 LINC00205P59089 165 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 GDF5OSQ5U4N7 250 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 IGFL2Q6UWQ7 119 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 FDCSPQ8NFU4 85 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 VPS25Q9BRG1 176 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 DEFB127Q9H1M4 99 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 SERTAD4Q9NUC0 356 aa10.25□□□□□ -0.77
APEX1-216ENST00000557159 TRAV3A0A0B4J244 114 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
APEX1-216ENST00000557159 BPIFB3P59826 476 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
APEX1-216ENST00000557159 RNF151Q2KHN1 245 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 C2orf83Q53S99 150 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 ALKBH2Q6NS38 261 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 ADTRPQ96IZ2 230 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 PRORYQ9H606 182 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 PEF1Q9UBV8 284 aaKnown RBP10.24□□□□□ -0.77
APEX1-216ENST00000557159 DUSP13Q9UII6 198 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 PRNDQ9UKY0 176 aa10.24□□□□□ -0.77
APEX1-216ENST00000557159 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
APEX1-216ENST00000557159 FLNBO75369 2602 aaKnown RBP10.24□□□□□ -0.77
APEX1-216ENST00000557159 PSMB11A5LHX3 300 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 OR7C2O60412 319 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 GRPP07492 148 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 ETFRF1Q6IPR1 90 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
APEX1-216ENST00000557159 WDR82Q6UXN9 313 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 SLC25A40Q8TBP6 338 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 IFI27L2Q9H2X8 130 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 C7orf69Q9H7B7 122 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 SCRT2Q9NQ03 307 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 ZFYVE26Q68DK2 2539 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 TRAV17A0A0B4J275 112 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 M0QZ24 198 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 NUDT3O95989 172 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 CA7P43166 264 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 LOXL3P58215 753 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
APEX1-216ENST00000557159 PRCDQ00LT1 54 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 OR4A47Q6IF82 309 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 SPATA12Q7Z6I5 190 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 CACNG8Q8WXS5 425 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 FAM168AQ92567 244 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 DPF1Q92782 380 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
APEX1-216ENST00000557159 NUDT11Q96G61 164 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 ZNF714Q96N38 554 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 IDI2-AS1Q9NZ38 188 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
APEX1-216ENST00000557159 ASH1LQ9NR48 2969 aaKnown RBP10.23□□□□□ -0.77
APEX1-216ENST00000557159 FAM231BA6NCW3 169 aa10.22□□□□□ -0.77
APEX1-216ENST00000557159 WNT9BO14905 357 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms