RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 PSG5Q15238 335 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 OR1C1Q15619 314 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 GABRA6Q16445 453 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 GCSAMLQ5JQS6 135 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 PSMG4Q5JS54 123 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 LCN12Q6JVE5 192 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 EBLN2Q6P2I7 272 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RNASEKQ6P5S7 137 aaKnown RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 DHRS13Q6UX07 377 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 SYT13Q7L8C5 426 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 YRDCQ86U90 279 aaKnown RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 ATOH7Q8N100 152 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 FAM19A2Q8N3H0 131 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 DEFB119Q8N690 84 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 FER1L6-AS1Q8NA97 138 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 NHLRC2Q8NBF2 726 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 OR4F17Q8NGA8 305 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 OR10D3Q8NH80 312 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 SVIPQ8NHG7 77 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 C18orf32Q8TCD1 76 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF488Q96MN9 340 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RCHY1Q96PM5 261 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 S1PR3Q99500 378 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 CDX2Q99626 313 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 MRPL32Q9BYC8 188 aaKnown RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 PRRG4Q9BZD6 226 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RNASE7Q9H1E1 156 aaKnown RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF430Q9H8G1 570 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 PROK2Q9HC23 129 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RAB9BQ9NP90 201 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 SCRT2Q9NQ03 307 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 TNFRSF19Q9NS68 423 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 DEPPQ9NTK1 212 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 HIF1ANQ9NWT6 349 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 CLCF1Q9UBD9 225 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RPH3ALQ9UNE2 315 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 RNF24Q9Y225 148 aa2.34□□□□□ -2.03
SLIRP-208ENST00000556956 LSM4Q9Y4Z0 139 aaKnown RBP2.34□□□□□ -2.03
SLIRP-208ENST00000556956 DNAH12Q6ZR08 3092 aa2.34□□□□□ -2.04
SLIRP-208ENST00000556956 MYOFQ9NZM1 2061 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 HEATR5BQ9P2D3 2071 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 KIAA0100Q14667 2235 aaKnown RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TICRRQ7Z2Z1 1910 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR2T8A6NH00 312 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 C2orf70A6NJV1 201 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 A8MWL6 223 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PRSS46E5RG02 174 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 M0R296 226 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PRYO14603 147 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SIVA1O15304 175 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 LINC01565O15544 149 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 CRXO43186 299 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SMPD2O60906 423 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 RHBDL1O75783 438 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 IGLV2-8P01709 118 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 APOA2P02652 100 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SP1P08047 785 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 NBEAP1P0C6P0 100 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR9G9P0C7N8 305 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 FRMD6-AS1P0C7T7 363 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SMIM17P0DL12 118 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 C8orf88P0DMB2 117 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 CCL2P13500 99 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 HTR1DP28221 377 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SSTR5P35346 364 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TCL1AP56279 114 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 BRWD1-AS2P59051 145 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 LINC00205P59089 165 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 ERVK11-1P61568 191 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 HSPE1P61604 102 aaKnown RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PSG9Q00887 426 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 RBPJQ06330 500 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 MZT1Q08AG7 82 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 IL11RAQ14626 422 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TBC1D28Q2M2D7 210 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SMIM21Q3B7S5 101 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 MAJINQ3KP22 176 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 MPV17L2Q567V2 206 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM97Q5BJF2 176 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SPINK9Q5DT21 86 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 Q6ZVH6 145 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 MIR17HGQ75NE6 70 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 DOLPP1Q86YN1 238 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 ABHD12Q8N2K0 398 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM251Q8N6I4 163 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 NUP35Q8NFH5 326 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR1L4Q8NGR5 311 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR1N2Q8NGR9 330 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR2Y1Q8NGV0 311 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR2T6Q8NHC8 308 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 ABHD3Q8WU67 409 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SSMEM1Q8WWF3 244 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 RLN3Q8WXF3 142 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM190Q8WZ59 177 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms