RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MARC2Q969Z3 335 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 ATP6V0BQ99437 205 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 TXN2Q99757 166 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 SLC25A21Q9BQT8 299 aaPredicted RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 MRPL27Q9P0M9 148 aaKnown RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 FLVCR2Q9UPI3 526 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 U3KQK5 164 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 IGHV3OR16-13A0A075B7E8 117 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 IGHV3-74A0A0B4J1X5 117 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 CORTO00230 105 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 SFT2D2O95562 160 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 NPY1RP25929 384 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 NPBWR1P48145 328 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 SRPXP78539 464 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 RELQ04864 619 aaPredicted RBP7.78□□□□□ -1.16
SNX6-208ENST00000556712 TNFRSF9Q07011 255 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 SMCO1Q147U7 214 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 DUSP18Q8NEJ0 188 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 OR1S1Q8NH92 325 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 RBKSQ9H477 322 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 TUBA4BQ9H853 241 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 SRD5A3Q9H8P0 318 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 GAR1Q9NY12 217 aaKnown RBP7.78□□□□□ -1.16
SNX6-208ENST00000556712 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
SNX6-208ENST00000556712 IGHV7-4-1A0A0J9YVY3 117 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 A0A1B0GU03 582 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 NAP1L6A6NFF2 107 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 C15orf62A8K5M9 175 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 A8MZ25 164 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 NDUFB6O95139 128 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 TMEM50AO95807 157 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 HTR2BP41595 481 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 C2orf83Q53S99 150 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 TOMM20LQ6UXN7 152 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 RBPMS2Q6ZRY4 209 aaKnown RBP7.77□□□□□ -1.17
SNX6-208ENST00000556712 OR52B4Q8NGK2 314 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 DTD1Q8TEA8 209 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 OR10C1Q96KK4 312 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 RETNQ9HD89 108 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 UBQLN2Q9UHD9 624 aa7.77□□□□□ -1.17
SNX6-208ENST00000556712 PUS1Q9Y606 427 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX6-208ENST00000556712 IGKV3-7A0A075B6H7 116 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 IGHV3-66A0A0C4DH42 116 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 DUXBA0A1W2PPF3 345 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 C9orf170A2RU37 121 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 OR11H12B2RN74 326 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 K7EMT4 169 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 PLA2G10O15496 165 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 CLN5O75503 358 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 APOHP02749 345 aaPredicted RBP7.76□□□□□ -1.17
SNX6-208ENST00000556712 HOXB5P09067 269 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 IAPPP10997 89 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 ANXA7P20073 488 aaKnown RBP7.76□□□□□ -1.17
SNX6-208ENST00000556712 HAGHQ16775 308 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 CNPY1Q3B7I2 92 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 TIGITQ495A1 244 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 SLC16A13Q7RTY0 426 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 LRTM2Q8N967 370 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 TMEM116Q8NCL8 245 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 OR4X1Q8NH49 305 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 RNF2Q99496 336 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 TM2D3Q9BRN9 247 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 HIPK2Q9H2X6 1198 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
SNX6-208ENST00000556712 TENM3Q9P273 2699 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 RPS10-NUDT3A0A1W2PQS6 291 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 RBMY1BA6NDE4 496 aaKnown RBP7.75□□□□□ -1.17
SNX6-208ENST00000556712 RBMY1EA6NEQ0 496 aaKnown RBP7.75□□□□□ -1.17
SNX6-208ENST00000556712 CENPXA8MT69 81 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 MPTX1A8MV57 137 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 CHEK1O14757 476 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 PITX3O75364 302 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 ADAP1O75689 374 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 IFNA10P01566 189 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 OR4E1P0C645 316 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 RBMY1DP0C7P1 496 aaKnown RBP7.75□□□□□ -1.17
SNX6-208ENST00000556712 RND2P52198 227 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 UBE2MP61081 183 aaKnown RBP7.75□□□□□ -1.17
SNX6-208ENST00000556712 DHRS2Q13268 280 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 PRSS54Q6PEW0 395 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 ST8SIA2Q92186 375 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 ACY3Q96HD9 319 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 C7orf50Q9BRJ6 194 aaKnown RBP7.75□□□□□ -1.17
SNX6-208ENST00000556712 MAGT1Q9H0U3 335 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 ZMAT4Q9H898 229 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 DNAH7Q8WXX0 4024 aa7.75□□□□□ -1.17
SNX6-208ENST00000556712 TRAV14DV4A0A0A6YYC5 116 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 A6NHS1 94 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 TSPAN4O14817 238 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 LYRM1O43325 122 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 IGLC1P0CG04 106 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms