RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IGLC7A0M8Q6 106 aa14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 COMPP49747 757 aaPredicted RBP14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 LGALS4P56470 323 aa14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 SSBP2P81877 361 aaPredicted RBP14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 TMEM144Q7Z5S9 345 aa14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 ABHD5Q8WTS1 349 aa14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 FNDC4Q9H6D8 234 aaPredicted RBP14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 VAX2Q9UIW0 290 aa14.65□□□□□ -0.06
SDR39U1-220ENST00000556548 OR10J1P30954 320 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 C21orf62-AS1Q17RA5 79 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 SPATA31B1PQ5VZV4 182 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 C1orf122Q6ZSJ8 110 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 KIR3DL3Q8N743 410 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 IGHV3-21A0A0B4J1V1 117 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 SEC14L6B5MCN3 397 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 INS-IGF2F8WCM5 200 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 H3BQ15 152 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 IFNA1P01562 189 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 MAS1LP35410 378 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 ATP5IP56385 69 aaPredicted RBP14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 SEPSECSQ9HD40 501 aaKnown RBP14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 FAM208BQ5VWN6 2430 aa14.64□□□□□ -0.07
SDR39U1-220ENST00000556548 UBR5O95071 2799 aaPredicted RBP14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 SUB1P53999 127 aaKnown RBP eCLIP14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 ATP5J2P56134 94 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 SLC35E3Q7Z769 313 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 FAM168AQ92567 244 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 LRRK2Q5S007 2527 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 PAGE4O60829 102 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 LINC00869P0C866 280 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 RPL29P47914 159 aaKnown RBP14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 PSMB3P49720 205 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 MFAP2P55001 183 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 UBE2G2P60604 165 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 SRSF1Q07955 248 aaKnown RBP eCLIP14.63□□□□□ -0.077e-7■■□□□ 11.5
SDR39U1-220ENST00000556548 RUSC1-AS1Q66K80 236 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 OR10D4PQ8NGN7 298 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 SLC35E1Q96K37 410 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 TBX15Q96SF7 602 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 MRPL36Q9P0J6 103 aaKnown RBP14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 SLC45A2Q9UMX9 530 aa14.63□□□□□ -0.07
SDR39U1-220ENST00000556548 CENPEQ02224 2701 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 FNDC10F2Z333 226 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 SOX15O60248 233 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 CNIH1O95406 144 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 NPIPB3Q92617 1050 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 PERPQ96FX8 193 aa14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 EAF1Q96JC9 268 aaPredicted RBP14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 UNKLQ9H9P5 680 aaKnown RBP14.62□□□□□ -0.07
SDR39U1-220ENST00000556548 IGHV4-61A0A0C4DH41 118 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 MOSP00540 346 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 ARL14EPLP0DKL9 152 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 NDUFA6P56556 154 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PRR20EP86478 221 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PRR20CP86479 221 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PRR20DP86480 221 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PRR20BP86481 221 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PRR20AP86496 221 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 MEF2BQ02080 365 aaPredicted RBP14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 FAM90A2PQ658T7 463 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 SRSF12Q8WXF0 261 aaKnown RBP14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 SPOCK3Q9BQ16 436 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 TEX22C9J3V5 150 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 NBR2O15453 112 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 FOXH1O75593 365 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 PAX1P15863 534 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 NUTF2P61970 127 aaKnown RBP14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 RHEBQ15382 184 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 FAM103A1Q9BTL3 118 aaKnown RBP14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 KCNIP2Q9NS61 270 aa14.61□□□□□ -0.07
SDR39U1-220ENST00000556548 RAB4AP20338 218 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 PCP4P48539 62 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 OR4F5Q8NH21 305 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 RNASEH2CQ8TDP1 164 aaKnown RBP14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 OR4F4Q96R69 305 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 PIMREGQ9BSJ6 248 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 DOK5Q9P104 306 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 NCBP2LA6PVI3 153 aaKnown RBP14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 USF2Q15853 346 aaPredicted RBP14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 ZNF674Q2M3X9 581 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 FAM78BQ5VT40 261 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 CYB5R2Q6BCY4 276 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 CACNG8Q8WXS5 425 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 RNF5Q99942 180 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 NIPSNAP3BQ9BS92 247 aa14.6□□□□□ -0.07
SDR39U1-220ENST00000556548 SLC25A33Q9BSK2 321 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 PRO1933Q9H354 126 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 FBN2P35556 2912 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 IGHV3OR16-10A0A075B7F0 116 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 RND2P52198 227 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 ZNF90Q03938 601 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 CST9LP1Q5W188 147 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 SPNS3Q6ZMD2 512 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 MIR17HGQ75NE6 70 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 C10orf105Q8TEF2 133 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 MANBALQ9NQG1 85 aa14.59□□□□□ -0.07
SDR39U1-220ENST00000556548 IGHV4-30-2A0A087WSY4 118 aa14.58□□□□□ -0.08
SDR39U1-220ENST00000556548 STAG3L2P0CL84 134 aa14.58□□□□□ -0.08
SDR39U1-220ENST00000556548 STAG3L3P0CL85 134 aa14.58□□□□□ -0.08
SDR39U1-220ENST00000556548 RHOBP62745 196 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms