RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZGRF1Q86YA3 2104 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 SGPP2Q8IWX5 399 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 RBMXL3Q8N7X1 1067 aaKnown RBP4.21□□□□□ -1.73
TMEM260-210ENST00000556422 LRTM2Q8N967 370 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 PLPPR1Q8TBJ4 325 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 MRPL30Q8TCC3 161 aaKnown RBP4.21□□□□□ -1.73
TMEM260-210ENST00000556422 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 TRAV17A0A0B4J275 112 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 IGKV1D-13A0A0B4J2D9 117 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 A0A1W2PRF3 423 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 A0A1W2PRM7 423 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 NUDT3O95989 172 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PRH1P02810 166 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 IGKV1-13P0DP09 117 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 TSPOP30536 169 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 SLC35B1P78383 322 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 HOXA4Q00056 320 aaPredicted RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 ELOBQ15370 118 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 DEFB109BQ30KR1 87 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 WDR31Q8NA23 367 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 C18orf12Q96KH6 178 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 C20orf173Q96LM9 149 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 HSD17B10Q99714 261 aaKnown RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 NPVFQ9HCQ7 196 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 LIN7CQ9NUP9 197 aaKnown RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 ICE1Q9Y2F5 2266 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 DSCAML1Q8TD84 2053 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 LOC107984640A0A0U1RRK4 108 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 A6NDN8 102 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 SH2D1BO14796 132 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 IGFBP2P18065 325 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 COL8A1P27658 744 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 RBMXP38159 391 aaKnown RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 IER3P46695 156 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PSG7Q13046 419 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 EDDM3AQ14507 147 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 ACSF3Q4G176 576 aaPredicted RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 Q6P435 159 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF880Q6PDB4 577 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 IL17RELQ6ZVW7 336 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 LYZL2Q7Z4W2 148 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 CXorf67Q86X51 503 aaPredicted RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 MKXQ8IYA7 352 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PARLQ9H300 379 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM106BQ9NUM4 274 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PCNX1Q96RV3 2341 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 K7EM74 188 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 DEDDO75618 318 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 CA2P00918 260 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 CGAP01215 116 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 HTR1DP28221 377 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 MPV17P39210 176 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 PPP1CBP62140 327 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 LIAT1Q6ZQX7 453 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF818PQ6ZRF7 136 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 Q6ZRG5 221 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 OR10G7Q8NGN6 311 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 FAM213BQ8TBF2 198 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 SLC25A40Q8TBP6 338 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 NIPSNAP3BQ9BS92 247 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 GGTLC1Q9BX51 225 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 SLC25A39Q9BZJ4 359 aaPredicted RBP4.21□□□□□ -1.74
TMEM260-210ENST00000556422 SLC35B3Q9H1N7 401 aa4.21□□□□□ -1.74
TMEM260-210ENST00000556422 DCHS2Q6V1P9 2916 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 TLN1Q9Y490 2541 aaKnown RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 TRBV6-6A0A0A6YYG2 114 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IQCF6A8MYZ5 107 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 H0YL77 283 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 J3QT63 122 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 HAX1O00165 279 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 MLNRO43193 412 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 HYPMO75409 117 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 FAM157CP0CG43 387 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 COL10A1Q03692 680 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 MEF2CQ06413 473 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 RTP5Q14D33 572 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 LCN15Q6UWW0 184 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 LINC00596Q86U02 117 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 CNEP1R1Q8N9A8 125 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 OR4X1Q8NH49 305 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 RARRES2Q99969 163 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM100Q9NV29 134 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 GNG12Q9UBI6 72 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 DSCAMO60469 2012 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 TRGV10A0A0A0MS01 117 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 IGHV3-64DA0A0J9YX35 117 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 DUXBA0A1W2PPF3 345 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 AGFG2O95081 481 aa4.2□□□□□ -1.74
TMEM260-210ENST00000556422 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms