RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RAB9AP51151 201 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 TPPP2P59282 170 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 FOXE3Q13461 319 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 C19orf54Q5BKX5 351 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 TEPPQ6URK8 271 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 Q6ZS46 218 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 OR4X2Q8NGF9 303 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 OR4X1Q8NH49 305 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 MS4A10Q96PG2 267 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 FANCD2OSQ96PS1 177 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 C21orf62Q9NYP8 219 aa7.22□□□□□ -1.25
ACTN1-218ENST00000556343 UBE2L5PA0A1B0GUS4 154 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 CLPSL1A2RUU4 121 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 I3L2K1 104 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 GNG7O60262 68 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 IGLV1-40P01703 118 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 PRH1P02810 166 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 FGF7P21781 194 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 S100A7P31151 101 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 MFAP2P55001 183 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 ARL16Q0P5N6 197 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 FOXL1Q12952 345 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 GAMTQ14353 236 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 VWC2Q2TAL6 325 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 C15orf32Q32M92 178 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 Q56UQ5 140 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 LAMTOR1Q6IAA8 161 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 BTNL8Q6UX41 500 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 BAP18Q8IXM2 172 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 TMEM116Q8NCL8 245 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 SCARB1Q8WTV0 552 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 TMEM170AQ8WVE7 144 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 NPIPB3Q92617 1050 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 TAF15Q92804 592 aaKnown RBP eCLIP7.21□□□□□ -1.26
ACTN1-218ENST00000556343 ACY3Q96HD9 319 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 SERTAD4Q9NUC0 356 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 PLXNB1O43157 2135 aa7.21□□□□□ -1.26
ACTN1-218ENST00000556343 ZFP92A6NM28 416 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 PRSS46E5RG02 174 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 K7EIM0 57 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 NUPL2O15504 423 aaKnown RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 CLN5O75503 358 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 NDUFB8O95169 186 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 CFDP00746 253 aaPredicted RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 MBP02144 154 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 FCGR2BP31994 310 aaPredicted RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 RND2P52198 227 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 SELENOTP62341 195 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 CFHR3Q02985 330 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 TMEM95Q3KNT9 176 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 RPL7L1Q6DKI1 246 aaKnown RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 SPSB3Q6PJ21 355 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 S100A7AQ86SG5 101 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 HAPLN4Q86UW8 402 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 OR5AU1Q8NGC0 362 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 STOML3Q8TAV4 291 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 WFDC12Q8WWY7 111 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 PHYHIPLQ96FC7 376 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 BSCL2Q96G97 398 aaPredicted RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 WDR61Q9GZS3 305 aaKnown RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 FNDC4Q9H6D8 234 aaPredicted RBP7.2□□□□□ -1.26
ACTN1-218ENST00000556343 WFDC1Q9HC57 220 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 WDR83OSQ9Y284 106 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 RNF114Q9Y508 228 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 TIMM9Q9Y5J7 89 aa7.2□□□□□ -1.26
ACTN1-218ENST00000556343 ZFHX3Q15911 3703 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 MAST4O15021 2626 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 NSD1Q96L73 2696 aaPredicted RBP7.19□□□□□ -1.26
ACTN1-218ENST00000556343 IGHV3-21A0A0B4J1V1 117 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 IFNA7P01567 189 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 PSMB8P28062 276 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 OR10J1P30954 320 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 CAMLGP49069 296 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 SERF2P84101 59 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 RELQ04864 619 aaPredicted RBP7.19□□□□□ -1.26
ACTN1-218ENST00000556343 MLANAQ16655 118 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 TREML4Q6UXN2 200 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 Q6ZRG5 221 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 RNF152Q8N8N0 203 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 THAP8Q8NA92 274 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 Q8WTZ3 238 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 ST8SIA2Q92186 375 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 TRGV9Q99603 122 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 GINS3Q9BRX5 216 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 CYTL1Q9NRR1 136 aa7.19□□□□□ -1.26
ACTN1-218ENST00000556343 TET2Q6N021 2002 aaPredicted RBP7.18□□□□□ -1.26
ACTN1-218ENST00000556343 FN1P02751 2386 aaKnown RBP7.18□□□□□ -1.26
ACTN1-218ENST00000556343 TCRBV4S1A1TA0A5B7 111 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 HAX1O00165 279 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 AGPAT2O15120 278 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 CLEC3BP05452 202 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 SEC11BP0C7V7 166 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 C19orf35Q6ZS72 473 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 OR2G3Q8NGZ4 309 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms