RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 SLA2Q9H6Q3 261 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 RANGRFQ9HD47 186 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 OR2C1O95371 312 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-238ENST00000556288 PSMB6P28072 239 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 CCDC190Q86UF4 302 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 GDPD1Q8N9F7 314 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 UXS1Q8NBZ7 420 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
ATXN3-238ENST00000556288 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 COMMD9Q9P000 198 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 HSPB7Q9UBY9 170 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-238ENST00000556288 VWFP04275 2813 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 FAM223BA6NKX1 122 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 H0Y980 276 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 H3BUA1 57 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 ST8SIA3O43173 380 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 NDUFB4O95168 129 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 CLEC3BP05452 202 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 HOXB5P09067 269 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 ZP3P21754 424 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 ARL3P36405 182 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 RND3P61587 244 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 HSPE1P61604 102 aaKnown RBP3.56□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF79Q15937 498 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 Q56UQ5 140 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 HAPLN4Q86UW8 402 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 TMED6Q8WW62 240 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 SEC22AQ96IW7 307 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
ATXN3-238ENST00000556288 SRRQ9GZT4 340 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms