RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	ZFP92	A6NM28	416 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	PMS2P5	A8MQ11	134 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	CD5L	O43866	347 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	MT-CO2	P00403	227 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	HBE1	P02100	147 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	REG1A	P05451	166 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	APELA	P0DMC3	54 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	AREG	P15514	252 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ELL	P55199	621 aa	Predicted RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	RUNX1	Q01196	453 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ARL16	Q0P5N6	197 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	VWC2	Q2TAL6	325 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	DEFB112	Q30KQ8	113 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	BSX	Q3C1V8	233 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	TMEM41B	Q5BJD5	291 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	KLF17	Q5JT82	389 aa	Predicted RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	FFAR4	Q5NUL3	377 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	UNQ5815/PRO19632	Q6UWF5	114 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067		Q6ZRG5	221 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	C9orf139	Q6ZV77	190 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	SLC16A13	Q7RTY0	426 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	HAPLN4	Q86UW8	402 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	COMMD7	Q86VX2	200 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	TMEM219	Q86XT9	240 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067		Q8N9W7	124 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ZNF114	Q8NC26	417 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	RBMXL1	Q96E39	390 aa	Known RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ACY3	Q96HD9	319 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	NPCDR1	Q9BY65	106 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	KRTAP4-2	Q9BYR5	136 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	SH3BGRL3	Q9H299	93 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ZNF355P	Q9NSJ1	428 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	WDR83OS	Q9Y284	106 aa		4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	F11R	Q9Y624	299 aa	Known RBP	4.4	□□□□□ -1.71
ATL1-208	ENST00000556067	ANKRD17	O75179	2603 aa	Known RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	TRAV30	A0A087WSZ9	112 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	LINC00862	A6NCI5	91 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067		A6NDX4	124 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	NPIPB5	A8MRT5	1133 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	TEX22	C9J3V5	150 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067		E7EUB6	86 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	IFNA1	P01562	189 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	NMB	P08949	121 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	S100A1	P23297	94 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	S100A7	P31151	101 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	NPBWR1	P48145	328 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	SELENOT	P62341	195 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	GAMT	Q14353	236 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	ECSCR	Q19T08	205 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	PXDC1	Q5TGL8	231 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	ACSM6	Q6P461	480 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	IL34	Q6ZMJ4	242 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	TMEM144	Q7Z5S9	345 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	SLC35E3	Q7Z769	313 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	S100A7A	Q86SG5	101 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067		Q8N1X5	172 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	TTC9C	Q8N5M4	171 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	COMMD1	Q8N668	190 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	C5orf56	Q8N8D9	126 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	LFNG	Q8NES3	379 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	OR5T1	Q8NG75	326 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	OR10G4	Q8NGN3	311 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	OR10G9	Q8NGN4	311 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	OR10G7	Q8NGN6	311 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	SGMS2	Q8NHU3	365 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	PCNP	Q8WW12	178 aa	Known RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	RNF2	Q99496	336 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	FAM103A1	Q9BTL3	118 aa	Known RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	RSG1	Q9BU20	258 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	PBDC1	Q9BVG4	233 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	HRH4	Q9H3N8	390 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	SLC39A9	Q9NUM3	307 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	MED9	Q9NWA0	146 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	GAR1	Q9NY12	217 aa	Known RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	DOPEY2	Q9Y3R5	2298 aa		4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	UTP20	O75691	2785 aa	Known RBP	4.39	□□□□□ -1.71
ATL1-208	ENST00000556067	COL12A1	Q99715	3063 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	HELZ2	Q9BYK8	2649 aa	Known RBP	4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	IGHV7-81	A0A0B4J1V7	117 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	TRAV41	A0A0B4J266	112 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	CGB1	A6NKQ9	187 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	PRSS46	E5RG02	174 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	AP4M1	O00189	453 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	AGPAT2	O15120	278 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	ATP6V1G1	O75348	118 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	IGHV4-59	P01825	116 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	CRYGC	P07315	174 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	FAM157C	P0CG43	387 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	CTRB1	P17538	263 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	M6PR	P20645	277 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	OR10J1	P30954	320 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	IER3	P46695	156 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	RPL29	P47914	159 aa	Known RBP	4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	RND2	P52198	227 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	MFAP4	P55083	255 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	B2M	P61769	119 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	RHOB	P62745	196 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms