RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 BPIFA4PQ86YQ2 179 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 FER1L6-AS1Q8NA97 138 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 DPF1Q92782 380 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 PAXXQ9BUH6 204 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 MYO9BQ13459 2157 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 A0A087X0K7 114 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 FAM231BA6NCW3 169 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 G3V4G9 280 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 UPK2O00526 184 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 CER1O95813 267 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 VHLLQ6RSH7 139 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 MOB3BQ86TA1 216 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 OR9G1Q8NH87 305 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 ZNF492Q9P255 531 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 KLF12Q9Y4X4 402 aa6.33□□□□□ -1.4
CHD8-209ENST00000555935 A6NDN8 102 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 H3BRM9 83 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 COX7A2P2O60397 106 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 HTR1DP28221 377 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 APOBEC3AP31941 199 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 DUSP3P51452 185 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 FOXA3P55318 350 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 TMEM97Q5BJF2 176 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 LYSMD4Q5XG99 296 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 INO80CQ6PI98 192 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 TMEM251Q8N6I4 163 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 GPR82Q96P67 336 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 PRSS22Q9GZN4 317 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 LOC102724200A0A096LPH7 203 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 TRAV5A0A0B4J249 113 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 C9orf118A6NHY6 69 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 DLL1O00548 723 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 TIMM8AO60220 97 aaPredicted RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 SAP30O75446 220 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 CEACAM3P40198 252 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 MYCNOSP40205 109 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 ABHD17BQ5VST6 288 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 C10orf113Q5VZT2 155 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 RBPMS2Q6ZRY4 209 aaKnown RBP6.32□□□□□ -1.4
CHD8-209ENST00000555935 GCSAMQ8N6F7 178 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 STXBP6Q8NFX7 210 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 OR1B1Q8NGR6 318 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 LRRC29Q8WV35 223 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 SARAFQ96BY9 339 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 CALYQ9NYX4 217 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 ABI3Q9P2A4 366 aa6.32□□□□□ -1.4
CHD8-209ENST00000555935 K7EP34 96 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 CHEK1O14757 476 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 P01737 135 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 SAA2P0DJI9 122 aaPredicted RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 S100A7P31151 101 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 HOXA4Q00056 320 aaPredicted RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 ASPHD1Q5U4P2 390 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 MORN5Q5VZ52 161 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 ZNF841Q6ZN19 808 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 FXYD5Q96DB9 178 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 ZNF430Q9H8G1 570 aaPredicted RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 FSCN3Q9NQT6 498 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 EPDR1Q9UM22 224 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 RPH3ALQ9UNE2 315 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 HCFC1P51610 2035 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 TET2Q6N021 2002 aaPredicted RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 TEX50A0A1B0GTY4 177 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 SRRM4A7MD48 611 aaKnown RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 APOA2P02652 100 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 PYYP10082 97 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 MYOD1P15172 320 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 RIPPLY3P57055 190 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 C3AR1Q16581 482 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 CT45A1Q5HYN5 189 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 C1orf229Q6ZS94 237 aaPredicted RBP6.31□□□□□ -1.4
CHD8-209ENST00000555935 PDPNQ86YL7 162 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 CT45A3Q8NHU0 189 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 FMC1Q96HJ9 113 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
CHD8-209ENST00000555935 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 C19orf71A6NCJ1 209 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 INS-IGF2F8WCM5 200 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 M0R296 226 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 CGB3P0DN86 165 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 CGB7P0DN87 165 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 NEGR1Q7Z3B1 354 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 OR5A1Q8NGJ0 315 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 GTSF1Q8WW33 167 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 HES7Q9BYE0 225 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
CHD8-209ENST00000555935 SRRM5B3KS81 715 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 PPIAL4DF5H284 164 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 HAX1O00165 279 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 NDUFS8O00217 210 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 IGHV3-13P01766 116 aa6.3□□□□□ -1.4
CHD8-209ENST00000555935 IGHV3-7P01780 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms