RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 FABP5P3A8MUU1 101 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 B4DSR2 109 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 OR2T1O43869 369 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 MRPS14O60783 128 aaKnown RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 OR7C1O76099 320 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 SULT1A3P0DMM9 295 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 SULT1A4P0DMN0 295 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 CD79AP11912 226 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BOP23527 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 S100A7P31151 101 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BBP33778 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 CSN1S1P47710 185 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 OMPP47874 163 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 FXYD2P54710 66 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BDP58876 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 DEFA1P59665 94 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 ARF6P62330 175 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BCP62807 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 ZNF345Q14585 488 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 ZNF846Q147U1 533 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 SURF2Q15527 256 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST2H2BEQ16778 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 ARHGAP11BQ3KRB8 267 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 TEX36Q5VZQ5 186 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 KRTAP26-1Q6PEX3 210 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 LCA10Q71F78 164 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 SLC51BQ86UW2 128 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 EXOC3-AS1Q8N2X6 119 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 WFDC5Q8TCV5 224 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BHQ93079 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 C12orf43Q96C57 262 aaKnown RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BNQ99877 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H2BMQ99879 126 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 TMEM147Q9BVK8 224 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 UQCC1Q9NVA1 299 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 GLTPQ9NZD2 209 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 BAIAP2Q9UQB8 552 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 TECTAO75443 2155 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 MED1Q15648 1581 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 TNRC6BQ9UPQ9 1833 aaKnown RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 IGKV1D-42A0A075B6H8 117 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 TRAV38-1A0A0B4J264 116 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 IRGMA1A4Y4 181 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 MEIS3P1A6NDR6 274 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 GGT3PA6NGU5 568 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 PSMD12O00232 456 aaPredicted RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 PPBPP02775 128 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 SERPINE1P05121 402 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 MIFP14174 115 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 KCNE1P15382 129 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 HIST1H4AP62805 103 aaKnown RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 HBA1P69905 142 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 MRPS15P82914 257 aaKnown RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 AKR1C1Q04828 323 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 CDK10Q15131 360 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 GRK1Q15835 563 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 FAM173BQ6P4H8 233 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 FP248Q71RG6 208 aaPredicted RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 KTN1-AS1Q86SY8 53 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 OOSP2Q86WS3 158 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 RPS19BP1Q86WX3 136 aaKnown RBP0.44□□□□□ -2.34
SCFD1-216ENST00000555550 Q8IYB0 196 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 GDPD1Q8N9F7 314 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 OR11H6Q8NGC7 330 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 OR51A2Q8NGJ7 313 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 ACOT12Q8WYK0 555 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 BORCS7Q96B45 105 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 TMEM126AQ9H061 195 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 PRTFDC1Q9NRG1 225 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 ARMC1Q9NVT9 282 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 MED9Q9NWA0 146 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 FKBP14Q9NWM8 211 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 NAT8Q9UHE5 227 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 C22orf24Q9Y442 160 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 ASB4Q9Y574 426 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 TRPM1Q7Z4N2 1603 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 SETD5Q9C0A6 1442 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 POLEQ07864 2286 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 FRMPD1Q5SYB0 1578 aa0.44□□□□□ -2.34
SCFD1-216ENST00000555550 MYH7BA7E2Y1 1941 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 TMEM238C9JI98 176 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 M0R378 163 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 TXNDC9O14530 226 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 NOS1APO75052 506 aaPredicted RBP0.43□□□□□ -2.34
SCFD1-216ENST00000555550 OR5F1O95221 314 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 RPSAP08865 295 aaKnown RBP0.43□□□□□ -2.34
SCFD1-216ENST00000555550 CRYGAP11844 174 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 COX6A1P12074 109 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 RPS4Y1P22090 263 aaKnown RBP0.43□□□□□ -2.34
SCFD1-216ENST00000555550 ATP5G3P48201 142 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 GNA12Q03113 381 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 PDE6HQ13956 83 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 RPL22L1Q6P5R6 122 aaKnown RBP0.43□□□□□ -2.34
SCFD1-216ENST00000555550 Q6Q795 121 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 LCN15Q6UWW0 184 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 CT55Q8WUE5 264 aa0.43□□□□□ -2.34
SCFD1-216ENST00000555550 DGCR14Q96DF8 476 aaKnown RBP0.43□□□□□ -2.34
SCFD1-216ENST00000555550 SLAMF6Q96DU3 332 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms