RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PLEKHG7Q6ZR37 379 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 ATOH7Q8N100 152 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 HIST3H2BBQ8N257 126 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 SIGLECL1Q8N7X8 197 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 LINC00301Q8NCQ3 95 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 ST6GALNAC3Q8NDV1 305 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 TMEM161BQ8NDZ6 487 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 OR10AC1Q8NH08 325 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 TERB2Q8NHR7 220 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 TEX47Q8TBZ9 253 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 PSMF1Q92530 271 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 GPR146Q96CH1 333 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 DCUN1D5Q9BTE7 237 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 PSTPIP2Q9H939 334 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 SPANXB1Q9NS25 103 aaPredicted RBP-0.34□□□□□ -2.46
SNX6-204ENST00000555541 SLC39A9Q9NUM3 307 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 NHP2Q9NX24 153 aaKnown RBP-0.34□□□□□ -2.46
SNX6-204ENST00000555541 HS3ST2Q9Y278 367 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 ASH1LQ9NR48 2969 aaKnown RBP-0.34□□□□□ -2.46
SNX6-204ENST00000555541 ANK2Q01484 3957 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 TRBV30A0A0K0K1B3 111 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 AHSA1O95433 338 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 S100A9P06702 114 aaKnown RBP-0.35□□□□□ -2.47
SNX6-204ENST00000555541 PMS2P3Q13401 168 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 CST9Q5W186 159 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 Q6ZS49 121 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 PXT1Q8NFP0 134 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 OR13D1Q8NGV5 346 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 SMIM19Q96E16 107 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 KCTD7Q96MP8 289 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 OR51V1Q9H2C8 321 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 ORMDL1Q9P0S3 153 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 TP73-AS1Q9UF72 201 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 V9GYY5 206 aaPredicted RBP-0.35□□□□□ -2.47
SNX6-204ENST00000555541 DENND4CQ5VZ89 1909 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 PIEZO1Q92508 2521 aa-0.35□□□□□ -2.47
SNX6-204ENST00000555541 MYO3BQ8WXR4 1341 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 ANKRD17O75179 2603 aaKnown RBP-0.36□□□□□ -2.47
SNX6-204ENST00000555541 TOPBP1Q92547 1522 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 SSNA1O43805 119 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 TYMSP04818 313 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 NKX2-5P52952 324 aaPredicted RBP-0.36□□□□□ -2.47
SNX6-204ENST00000555541 ESRGQ1W209 222 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 BRMS1LQ5PSV4 323 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 DEFB125Q8N687 156 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 OR13C4Q8NGS5 318 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 TMEM254Q8TBM7 123 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 MRPL30Q8TCC3 161 aaKnown RBP-0.36□□□□□ -2.47
SNX6-204ENST00000555541 DNAJB3Q8WWF6 145 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 KLK6Q92876 244 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 WFDC10AQ9H1F0 79 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 MAP1LC3AQ9H492 121 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 TMEM138Q9NPI0 162 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 ERGIC3Q9Y282 383 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 MCM3APO60318 1980 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 PIK3R4Q99570 1358 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 HIVEP3Q5T1R4 2406 aa-0.36□□□□□ -2.47
SNX6-204ENST00000555541 IGF2RP11717 2491 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 NSD1Q96L73 2696 aaPredicted RBP-0.37□□□□□ -2.47
SNX6-204ENST00000555541 TRAV9-1A0A075B6T8 112 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 TCRBV4S1A1TA0A5B7 111 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 F5H768 121 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 H3BRM9 83 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 PFDN6O15212 129 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 TPM1P09493 284 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 RPL12P30050 165 aaKnown RBP-0.37□□□□□ -2.47
SNX6-204ENST00000555541 MARCKSL1P49006 195 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 KRTAP6-1Q3LI64 71 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 C1orf195Q5TG92 126 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 TRAPPC6BQ86SZ2 158 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 FUNDC1Q8IVP5 155 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 Q8N402 240 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 TREM1Q9NP99 234 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 C14orf132Q9NPU4 83 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 OSTCQ9NRP0 149 aa-0.37□□□□□ -2.47
SNX6-204ENST00000555541 MUC4Q99102 2169 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 DCCP43146 1447 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 TRAV23DV6A0A075B6W5 121 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 A0A1B0GV50 99 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 TMEM213A2RRL7 107 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 TRPC5OSA6NMA1 111 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 EVPLLA8MZ36 301 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 ZNF879B4DU55 563 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 IFNA10P01566 189 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 CD2P06729 351 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 UCHL3P15374 230 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 S100A4P26447 101 aaKnown RBP-0.38□□□□□ -2.47
SNX6-204ENST00000555541 Q5BKY6 102 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 LPCAT3Q6P1A2 487 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 C10orf99Q6UWK7 81 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 C2orf82Q6UX34 121 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 Q86TA4 180 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 TEN1Q86WV5 123 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 SYCE1Q8N0S2 351 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 LRRC25Q8N386 305 aaPredicted RBP-0.38□□□□□ -2.47
SNX6-204ENST00000555541 OR52L1Q8NGH7 329 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 OR2T35Q8NGX2 323 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 H1FXQ92522 213 aaKnown RBP-0.38□□□□□ -2.47
SNX6-204ENST00000555541 LINC00052Q96N35 136 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 FBXL12Q9NXK8 326 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms