RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TMED3Q9Y3Q3 217 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 LSM4Q9Y4Z0 139 aaKnown RBP9.18□□□□□ -0.94
SRP54-206ENST00000555317 MED6O75586 246 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 IFNA21P01568 189 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 CTSGP08311 255 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 HOXB5P09067 269 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 OR4E1P0C645 316 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 NPY1RP25929 384 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 C2orf83Q53S99 150 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 RBPMS2Q6ZRY4 209 aaKnown RBP9.17□□□□□ -0.94
SRP54-206ENST00000555317 RBKSQ9H477 322 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 MRPL27Q9P0M9 148 aaKnown RBP9.17□□□□□ -0.94
SRP54-206ENST00000555317 FLVCR2Q9UPI3 526 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 U3KQ87 197 aa9.17□□□□□ -0.94
SRP54-206ENST00000555317 IGHV3OR16-8A0A075B7F1 116 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 C9orf170A2RU37 121 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 C15orf62A8K5M9 175 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
SRP54-206ENST00000555317 SLC25A6P12236 298 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
SRP54-206ENST00000555317 BTCP35070 178 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 BMI1P35226 326 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 ADMP35318 185 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 CD81P60033 236 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 DHRS2Q13268 280 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 ZNF846Q147U1 533 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 BSXQ3C1V8 233 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 MZT2BQ6NZ67 158 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 BTNL8Q6UX41 500 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 ADAMTSL5Q6ZMM2 481 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 LYG2Q86SG7 212 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
SRP54-206ENST00000555317 GINS3Q9BRX5 216 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 C20orf85Q9H1P6 137 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 TUBA4BQ9H853 241 aa9.16□□□□□ -0.94
SRP54-206ENST00000555317 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 ZNF207O43670 478 aaKnown RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 IFNA4P05014 189 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 SLC25A4P12235 298 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 EDN2P20800 178 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 ATP5IP56385 69 aaPredicted RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 GGNBP1Q5YKI7 109 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 LAMTOR1Q6IAA8 161 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 SLC16A13Q7RTY0 426 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 WDR89Q96FK6 387 aaPredicted RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 CIB3Q96Q77 187 aaPredicted RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 MLXQ9UH92 298 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 PAIP2BQ9ULR5 123 aaKnown RBP9.15□□□□□ -0.94
SRP54-206ENST00000555317 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
SRP54-206ENST00000555317 TRAV6A0A075B6T7 132 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 TRAV30A0A087WSZ9 112 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 FAM240BA0A1B0GVZ2 78 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 K7EMT4 169 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 WRBO00258 174 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 PLA2G10O15496 165 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 CLN5O75503 358 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 SCAF4O95104 1147 aaKnown RBP9.14□□□□□ -0.95
SRP54-206ENST00000555317 FRMD6-AS1P0C7T7 363 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 NHLRC4P0CG21 123 aaPredicted RBP9.14□□□□□ -0.95
SRP54-206ENST00000555317 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 RAB11AP62491 216 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 ZNF600Q6ZNG1 722 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 TMEM61Q8N0U2 210 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 OR4X1Q8NH49 305 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 NUDT15Q9NV35 164 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 STAB2Q8WWQ8 2551 aa9.14□□□□□ -0.95
SRP54-206ENST00000555317 TRAV14DV4A0A0A6YYC5 116 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 TMEM50AO95807 157 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 TCRBP04435 133 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 IGHV4-30-4P0DP06 118 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 IAPPP10997 89 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 RND2P52198 227 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 TMEM116Q8NCL8 245 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 OR52B4Q8NGK2 314 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 OR1S2Q8NGQ3 325 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 ENKURQ8TC29 256 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 NARS2Q96I59 477 aaKnown RBP9.13□□□□□ -0.95
SRP54-206ENST00000555317 ASCL2Q99929 193 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 NEURL2Q9BR09 285 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 MAGT1Q9H0U3 335 aa9.13□□□□□ -0.95
SRP54-206ENST00000555317 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
SRP54-206ENST00000555317 PUS1Q9Y606 427 aaKnown RBP eCLIP9.13□□□□□ -0.95
SRP54-206ENST00000555317 IGHV7-4-1A0A0J9YVY3 117 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 SYNGR2O43760 224 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 PITX3O75364 302 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 ADAP1O75689 374 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 OR10J1P30954 320 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 ASAH1Q13510 395 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 C11orf87Q6NUJ2 197 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 TOMM20LQ6UXN7 152 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 Q8N1Y9 231 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 SLC35E1Q96K37 410 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms