RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 FAM236BA0A1B0GV22 79 aa2.57□□□□□ -2
KTN1-220ENST00000555172 K7ERJ3 54 aa2.57□□□□□ -2
KTN1-220ENST00000555172 HLA-DQA1P01909 254 aa2.57□□□□□ -2
KTN1-220ENST00000555172 MT3P25713 68 aa2.57□□□□□ -2
KTN1-220ENST00000555172 RHOGP84095 191 aa2.57□□□□□ -2
KTN1-220ENST00000555172 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
KTN1-220ENST00000555172 RELAQ04206 551 aa2.57□□□□□ -2
KTN1-220ENST00000555172 NCMAPQ5T1S8 102 aa2.57□□□□□ -2
KTN1-220ENST00000555172 AMMECR1LQ6DCA0 310 aa2.57□□□□□ -2
KTN1-220ENST00000555172 LINC00305Q7Z4B0 112 aa2.57□□□□□ -2
KTN1-220ENST00000555172 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
KTN1-220ENST00000555172 OR8D4Q8NGM9 314 aa2.57□□□□□ -2
KTN1-220ENST00000555172 PPTC7Q8NI37 304 aa2.57□□□□□ -2
KTN1-220ENST00000555172 IFI27L2Q9H2X8 130 aa2.57□□□□□ -2
KTN1-220ENST00000555172 PRDM2Q13029 1718 aa2.57□□□□□ -2
KTN1-220ENST00000555172 TMEM223A0PJW6 202 aa2.56□□□□□ -2
KTN1-220ENST00000555172 FAM168BA1KXE4 195 aa2.56□□□□□ -2
KTN1-220ENST00000555172 K7ERS5 55 aa2.56□□□□□ -2
KTN1-220ENST00000555172 M0R129 80 aa2.56□□□□□ -2
KTN1-220ENST00000555172 CCL25O15444 150 aa2.56□□□□□ -2
KTN1-220ENST00000555172 RPS10P46783 165 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 GNB2P62879 340 aa2.56□□□□□ -2
KTN1-220ENST00000555172 HES1Q14469 280 aa2.56□□□□□ -2
KTN1-220ENST00000555172 MRGPRG-AS1Q2M3A8 158 aa2.56□□□□□ -2
KTN1-220ENST00000555172 LDLRAD2Q5SZI1 272 aa2.56□□□□□ -2
KTN1-220ENST00000555172 RPL22L1Q6P5R6 122 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 TCTEX1D1Q8N7M0 179 aa2.56□□□□□ -2
KTN1-220ENST00000555172 MARCOQ9UEW3 520 aaPredicted RBP2.56□□□□□ -2
KTN1-220ENST00000555172 LINC00588Q9Y4M8 146 aa2.56□□□□□ -2
KTN1-220ENST00000555172 IGKV6D-41A0A0C4DH26 115 aa2.56□□□□□ -2
KTN1-220ENST00000555172 TMEM212A6NML5 194 aa2.56□□□□□ -2
KTN1-220ENST00000555172 GPX1P07203 203 aa2.56□□□□□ -2
KTN1-220ENST00000555172 ZNF728P0DKX0 622 aa2.56□□□□□ -2
KTN1-220ENST00000555172 P0DMU3 169 aa2.56□□□□□ -2
KTN1-220ENST00000555172 FAM231AP0DMU4 169 aa2.56□□□□□ -2
KTN1-220ENST00000555172 FAM231CP0DMU5 169 aa2.56□□□□□ -2
KTN1-220ENST00000555172 CCL3P10147 92 aa2.56□□□□□ -2
KTN1-220ENST00000555172 LGALS3P17931 250 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 S100A4P26447 101 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 MRPS10P82664 201 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 C14orf177Q52M58 125 aa2.56□□□□□ -2
KTN1-220ENST00000555172 BCL2L15Q5TBC7 163 aa2.56□□□□□ -2
KTN1-220ENST00000555172 C16orf47Q6ZP98 133 aaPredicted RBP2.56□□□□□ -2
KTN1-220ENST00000555172 WFDC11Q8NEX6 87 aa2.56□□□□□ -2
KTN1-220ENST00000555172 LINC01560Q8TB33 94 aa2.56□□□□□ -2
KTN1-220ENST00000555172 TBL1YQ9BQ87 522 aa2.56□□□□□ -2
KTN1-220ENST00000555172 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 C11orf1Q9H5F2 150 aa2.56□□□□□ -2
KTN1-220ENST00000555172 C16orf95Q9H693 158 aa2.56□□□□□ -2
KTN1-220ENST00000555172 TAF9BQ9HBM6 251 aa2.56□□□□□ -2
KTN1-220ENST00000555172 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
KTN1-220ENST00000555172 SNX12Q9UMY4 172 aa2.56□□□□□ -2
KTN1-220ENST00000555172 U3KQK5 164 aa2.56□□□□□ -2
KTN1-220ENST00000555172 A2MP01023 1474 aa2.56□□□□□ -2
KTN1-220ENST00000555172 PHLPP1O60346 1717 aa2.55□□□□□ -2
KTN1-220ENST00000555172 CEP170Q5SW79 1584 aa2.55□□□□□ -2
KTN1-220ENST00000555172 IGKV3D-15A0A087WSY6 115 aa2.55□□□□□ -2
KTN1-220ENST00000555172 IGHV1-3A0A0C4DH29 117 aa2.55□□□□□ -2
KTN1-220ENST00000555172 C19orf71A6NCJ1 209 aa2.55□□□□□ -2
KTN1-220ENST00000555172 ZNF670-ZNF695F2Z2N8 137 aa2.55□□□□□ -2
KTN1-220ENST00000555172 H3BMG7 143 aa2.55□□□□□ -2
KTN1-220ENST00000555172 CST7O76096 145 aa2.55□□□□□ -2
KTN1-220ENST00000555172 TCRAP04437 139 aa2.55□□□□□ -2
KTN1-220ENST00000555172 SRP14P37108 136 aaKnown RBP2.55□□□□□ -2
KTN1-220ENST00000555172 ARPP19P56211 112 aa2.55□□□□□ -2
KTN1-220ENST00000555172 PPP3R1P63098 170 aa2.55□□□□□ -2
KTN1-220ENST00000555172 EIF5AP63241 154 aaKnown RBP2.55□□□□□ -2
KTN1-220ENST00000555172 DIAPH2-AS1Q14236 149 aa2.55□□□□□ -2
KTN1-220ENST00000555172 TMEM69Q5SWH9 247 aa2.55□□□□□ -2
KTN1-220ENST00000555172 TERB2Q8NHR7 220 aa2.55□□□□□ -2
KTN1-220ENST00000555172 ZFP30Q9Y2G7 519 aa2.55□□□□□ -2
KTN1-220ENST00000555172 FOCADQ5VW36 1801 aa2.55□□□□□ -2
KTN1-220ENST00000555172 SPATA31E1Q6ZUB1 1445 aa2.55□□□□□ -2
KTN1-220ENST00000555172 UHRF1BP1LA0JNW5 1464 aa2.54□□□□□ -2
KTN1-220ENST00000555172 PINLYPA6NC86 204 aa2.54□□□□□ -2
KTN1-220ENST00000555172 ARRDC5A6NEK1 342 aa2.54□□□□□ -2
KTN1-220ENST00000555172 GGTLC3B5MD39 225 aa2.54□□□□□ -2
KTN1-220ENST00000555172 H3BMM0 161 aa2.54□□□□□ -2
KTN1-220ENST00000555172 GGCTO75223 188 aaKnown RBP2.54□□□□□ -2
KTN1-220ENST00000555172 NPPCP23582 126 aa2.54□□□□□ -2
KTN1-220ENST00000555172 FOXA3P55318 350 aaPredicted RBP2.54□□□□□ -2
KTN1-220ENST00000555172 RPL18Q07020 188 aaKnown RBP2.54□□□□□ -2
KTN1-220ENST00000555172 TRAPPC6BQ86SZ2 158 aa2.54□□□□□ -2
KTN1-220ENST00000555172 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
KTN1-220ENST00000555172 UBE2WQ96B02 151 aa2.54□□□□□ -2
KTN1-220ENST00000555172 SDF2Q99470 211 aa2.54□□□□□ -2
KTN1-220ENST00000555172 MGLLQ99685 303 aa2.54□□□□□ -2
KTN1-220ENST00000555172 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
KTN1-220ENST00000555172 RNF122Q9H9V4 155 aa2.54□□□□□ -2
KTN1-220ENST00000555172 OR5V1Q9UGF6 321 aa2.54□□□□□ -2
KTN1-220ENST00000555172 EPDR1Q9UM22 224 aa2.54□□□□□ -2
KTN1-220ENST00000555172 KLK5Q9Y337 293 aaPredicted RBP2.54□□□□□ -2
KTN1-220ENST00000555172 EML6Q6ZMW3 1958 aa2.54□□□□□ -2
KTN1-220ENST00000555172 MAST2Q6P0Q8 1798 aa2.54□□□□□ -2
KTN1-220ENST00000555172 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.54□□□□□ -2
KTN1-220ENST00000555172 IGLV3-10A0A075B6K4 115 aa2.54□□□□□ -2
KTN1-220ENST00000555172 TRAV13-1A0A0B4J241 112 aa2.54□□□□□ -2
KTN1-220ENST00000555172 IGHV1-58A0A0C4DH39 117 aa2.54□□□□□ -2
KTN1-220ENST00000555172 PVALEFA0A1B0GWK0 134 aa2.54□□□□□ -2
KTN1-220ENST00000555172 ZNF727A8MUV8 499 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms