RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.7	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR1A1	Q9P1Q5	309 aa		3.7	□□□□□ -1.82
PSMC6-208	ENST00000554956	JPT1	Q9UK76	154 aa		3.7	□□□□□ -1.82
PSMC6-208	ENST00000554956	CSDC2	Q9Y534	153 aa	Known RBP	3.7	□□□□□ -1.82
PSMC6-208	ENST00000554956	SORL1	Q92673	2214 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	SOCS1	O15524	211 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CA11	O75493	328 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	ATP5H	O75947	161 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CA2	P00918	260 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	IGLV2-23	P01705	113 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	GLA	P06280	429 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	SCT	P09683	121 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CD3G	P09693	182 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR8U9	P0C7N5	309 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CT45A10	P0DMU9	189 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CD37	P11049	281 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CEL	P19835	753 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	RND3	P61587	244 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	ST3GAL4	Q11206	333 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	GPR176	Q14439	515 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	CNPY1	Q3B7I2	92 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	AKIRIN2	Q53H80	203 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	ACTBL2	Q562R1	376 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	YIF1B	Q5BJH7	314 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	LY6G6F	Q5SQ64	297 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF880	Q6PDB4	577 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	UNQ5815/PRO19632	Q6UWF5	114 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMPRSS11A	Q6ZMR5	421 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	TPRA1	Q86W33	373 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR5T1	Q8NG75	326 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	GALM	Q96C23	342 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR4C12	Q96R67	309 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	C9orf16	Q9BUW7	83 aa		3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	METTL1	Q9UBP6	276 aa	Known RBP	3.69	□□□□□ -1.82
PSMC6-208	ENST00000554956	HYDIN	Q4G0P3	5121 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	STARD9	Q9P2P6	4700 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	CSMD3	Q7Z407	3707 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	RBMY1B	A6NDE4	496 aa	Known RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	RBMY1E	A6NEQ0	496 aa	Known RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956		A8MU10	97 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM14DP	A8MWL7	114 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956		H7C2Y5	167 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	DYNC1I1	O14576	645 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	ATP5L	O75964	103 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	KBTBD11	O94819	623 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TRGV3	P03979	118 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	RBMY1D	P0C7P1	496 aa	Known RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	APELA	P0DMC3	54 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	CEACAM6	P40199	344 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	SYNJ2BP	P57105	145 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TPPP2	P59282	170 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	PLP1	P60201	277 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	PITPNA	Q00169	270 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	FXYD3	Q14802	87 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	C1orf100	Q5SVJ3	147 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	RNLS	Q5VYX0	342 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF57	Q68EA5	555 aa	Predicted RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	PVRIG	Q6DKI7	326 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZFP1	Q6P2D0	407 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR6Q1	Q8NGQ2	317 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	GRPEL2	Q8TAA5	225 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM80	Q96HE8	168 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	UQCC2	Q9BRT2	126 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TM2D1	Q9BX74	207 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	CST11	Q9H112	138 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	LPAR5	Q9H1C0	372 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	WFDC10A	Q9H1F0	79 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	GEMIN7	Q9H840	131 aa	Known RBP	3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	KCNIP1	Q9NZI2	227 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	CKLF	Q9UBR5	152 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	AK3	Q9UIJ7	227 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	WASHC3	Q9Y3C0	194 aa		3.68	□□□□□ -1.82
PSMC6-208	ENST00000554956	TRBV6-6	A0A0A6YYG2	114 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	SMCO3	A2RU48	225 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR5H14	A6NHG9	310 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	SLC17A2	O00624	439 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	RAB29	O14966	203 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	SLC22A1	O15245	554 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	PRH1	P02810	166 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	CD7	P09564	240 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	MYL12A	P19105	171 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ALDH3B2	P48448	385 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	CLDN12	P56749	244 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	KRTAP12-2	P59991	146 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	PLGLA	Q15195	96 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ACSM3	Q53FZ2	586 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF600	Q6ZNG1	722 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM91	Q6ZNR0	172 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	C19orf35	Q6ZS72	473 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	AHSA2	Q719I0	299 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	MTURN	Q8N3F0	131 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR9G4	Q8NGQ1	327 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	CYGB	Q8WWM9	190 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	PTX4	Q96A99	478 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ISOC1	Q96CN7	298 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	FLYWCH2	Q96CP2	140 aa	Known RBP	3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	AUNIP	Q9H7T9	357 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF355P	Q9NSJ1	428 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	FKBP14	Q9NWM8	211 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 596.5 ms