RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RPS16P62249 146 aaKnown RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 PSG5Q15238 335 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 IZUMO4Q1ZYL8 232 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 UNQ5815/PRO19632Q6UWF5 114 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 SSX9Q7RTT3 188 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 STX12Q86Y82 276 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 TEX45Q8NA69 505 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM167AQ8TBQ9 72 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 DTD1Q8TEA8 209 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 ABHD5Q8WTS1 349 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 ST8SIA2Q92186 375 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 MS4A10Q96PG2 267 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 TSNAXQ99598 290 aaKnown RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 MAGT1Q9H0U3 335 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 METTL1Q9UBP6 276 aaKnown RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 FBXL17Q9UF56 701 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 UBQLN2Q9UHD9 624 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 RYR2Q92736 4967 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 BORCS7-ASMTA0A0B4J1R7 106 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 CEBPZOSA8MTT3 80 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 INS-IGF2F8WCM5 200 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM50AO95807 157 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 CA2P00918 260 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 HSPB1P04792 205 aaKnown RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 SAA1P0DJI8 122 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 MAS1LP35410 378 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 SULT1A1P50225 295 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 CAV2P51636 162 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 TPPP2P59282 170 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 RPP30P78346 268 aaKnown RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 EXOSC2Q13868 293 aaKnown RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 PLGLAQ15195 96 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 NDUFA5Q16718 116 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 AKIRIN2Q53H80 203 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 EIF5AL1Q6IS14 154 aaKnown RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM14EPQ6UXP3 125 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 BAP18Q8IXM2 172 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 Q8N1Y9 231 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 UBAC2Q8NBM4 344 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 SCARB1Q8WTV0 552 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 LYSTQ99698 3801 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 QTRT1Q9BXR0 403 aaKnown RBP8.09□□□□□ -1.11
SHMT2-215ENST00000554656 CYTL1Q9NRR1 136 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 PSENENQ9NZ42 101 aa8.09□□□□□ -1.11
SHMT2-215ENST00000554656 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 IGSF23A1L1A6 192 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
SHMT2-215ENST00000554656 DFFBO76075 338 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 IFNA17P01571 189 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 RPL8P62917 257 aaKnown RBP8.08□□□□□ -1.12
SHMT2-215ENST00000554656 HBG1P69891 147 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 HBG2P69892 147 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 DEFA5Q01523 94 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 PJVKQ0ZLH3 352 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 ZNF266Q14584 549 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 ATP6V1FQ16864 119 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 ZNF562Q6V9R5 426 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 MMD2Q8IY49 270 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 ARV1Q9H2C2 271 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 HIPK2Q9H2X6 1198 aa8.08□□□□□ -1.12
SHMT2-215ENST00000554656 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
SHMT2-215ENST00000554656 STARD9Q9P2P6 4700 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 TRAV3A0A0B4J244 114 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 SLC25A17O43808 307 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 IGLV1-51P01701 117 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 TRGV3P03979 118 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 CRYGBP07316 175 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 IAPPP10997 89 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 PRCDQ00LT1 54 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 TMEM267Q0VDI3 215 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-215ENST00000554656 MRGPRG-AS1Q2M3A8 158 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 IL34Q6ZMJ4 242 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 OR1S2Q8NGQ3 325 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 CITED4Q96RK1 184 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 PARD6GQ9BYG4 376 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-215ENST00000554656 COMMD5Q9GZQ3 224 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 ENY2Q9NPA8 101 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 C19orf73Q9NVV2 129 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 OR51B2Q9Y5P1 312 aa8.07□□□□□ -1.12
SHMT2-215ENST00000554656 NXPH3O95157 252 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-215ENST00000554656 TRBV12-3P01733 135 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 OR2B8PP59922 312 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 RAB14P61106 215 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 NHLH2Q02577 135 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 FXYD3Q14802 87 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 CLLU1Q5K131 121 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 PINX1Q96BK5 328 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms