RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PATZ1Q9HBE1 687 aaKnown RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 DOPEY1Q5JWR5 2465 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 ENSAO43768 121 aaKnown RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 SAA1P0DJI8 122 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 CHRNA7P36544 502 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 MEF2BQ02080 365 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 UBTD1Q9HAC8 227 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 OR51B2Q9Y5P1 312 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 PXMP4Q9Y6I8 212 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 M0QZ24 198 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 KBTBD11O94819 623 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 S100A7P31151 101 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 ZNF841Q6ZN19 808 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 ZNF833PQ6ZTB9 187 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 Q8N976 141 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 OR5B12Q96R08 314 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 A0A1W2PRD5 423 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 A0A1W2PRF3 423 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 A0A1W2PRM7 423 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 RNF151Q2KHN1 245 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 MOB3BQ86TA1 216 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 IMMP2LQ96T52 175 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 PARLQ9H300 379 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 ONECUT1Q9UBC0 465 aa9.46□□□□□ -0.89
SHMT2-212ENST00000554467 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 F2Z2F3 143 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 H0YJW9 148 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 APELAP0DMC3 54 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 ITLN2Q8WWU7 325 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-212ENST00000554467 E7EUB6 86 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 OR5G3P0C626 314 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 ADMP35318 185 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 CTRLP40313 264 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 SERF2P84101 59 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
SHMT2-212ENST00000554467 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 ALKBH7Q9BT30 221 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-212ENST00000554467 NPCDR1Q9BY65 106 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM14BQ9NUH8 114 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.9
SHMT2-212ENST00000554467 PPIAL4CA0A0B4J2A2 164 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 CA2P00918 260 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 PPIAL4GP0DN37 164 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 ORAOV1Q8WV07 137 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 C22orf46C9J442 243 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 APOA2P02652 100 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 HSPE1P61604 102 aaKnown RBP9.45□□□□□ -0.9
SHMT2-212ENST00000554467 UBE2V1Q13404 147 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 HSPB9Q9BQS6 159 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 VAMP8Q9BV40 100 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM133Q9H2Q1 129 aa9.45□□□□□ -0.9
SHMT2-212ENST00000554467 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 NPPCP23582 126 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 CD1BP29016 333 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 ARF6P62330 175 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 MLANAQ16655 118 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM183BQ1AE95 376 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM144Q7Z5S9 345 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 CMTM2Q8TAZ6 248 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 SSMEM1Q8WWF3 244 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 NABP2Q9BQ15 211 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 GSX1Q9H4S2 264 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-212ENST00000554467 ENY2Q9NPA8 101 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 CNTFRP26992 372 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 PPOXP50336 477 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 CLEC2AQ6UVW9 174 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 UNQ5815/PRO19632Q6UWF5 114 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 FLYWCH2Q96CP2 140 aaKnown RBP9.44□□□□□ -0.9
SHMT2-212ENST00000554467 IGHV2-26A0A0B4J1V2 119 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 TEX50A0A1B0GTY4 177 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 UPK2O00526 184 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 C11orf71Q6IPW1 123 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 OR9G1Q8NH87 305 aa9.44□□□□□ -0.9
SHMT2-212ENST00000554467 PSMG3Q9BT73 122 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-212ENST00000554467 FOXA2Q9Y261 457 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-212ENST00000554467 ZNF320A2RRD8 509 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 SLC25A17O43808 307 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 TOMM40O96008 361 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 PRB1P04280 392 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 NPY1RP25929 384 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 SRP14P37108 136 aaKnown RBP9.43□□□□□ -0.9
SHMT2-212ENST00000554467 SLC24A4Q8NFF2 622 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 DERL1Q9BUN8 251 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 FAM90A9PA6NNJ1 464 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 C11orf94C9JXX5 98 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 KLRD1Q13241 179 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 ATP6V1FQ16864 119 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 PNKDQ8N490 385 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms