RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CEACAM21Q3KPI0 293 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SP6Q3SY56 376 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 OR10J3Q5JRS4 329 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 RPL7L1Q6DKI1 246 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SPNS3Q6ZMD2 512 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SLC25A26Q70HW3 274 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 LYZL2Q7Z4W2 148 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KIR2DL5AQ8N109 375 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 FAM71E2Q8N5Q1 922 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 WDR31Q8NA23 367 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ZFP62Q8NB50 900 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KIR2DL5BQ8NHK3 375 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 LHFPL5Q8TAF8 219 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 FNDC9Q8TBE3 224 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 FAM57AQ8TBR7 257 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 MRGPRDQ8TDS7 321 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 IL1F10Q8WWZ1 152 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 APOBEC3DQ96AK3 386 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 GMPPAQ96IJ6 420 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ADTRPQ96IZ2 230 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SMIM8Q96KF7 97 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 TSNAXQ99598 290 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 LITAFQ99732 161 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 TMEM208Q9BTX3 173 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 TLNRD1Q9H1K6 362 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DEFB127Q9H1M4 99 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ARV1Q9H2C2 271 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF286AQ9HBT8 521 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 WFDC1Q9HC57 220 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KCNJ16Q9NPI9 418 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 GSKIPQ9P0R6 139 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4Q9UBX2 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF629Q9UEG4 869 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SMPXQ9UHP9 88 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KLF13Q9Y2Y9 288 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 MED12LQ86YW9 2145 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 IGKV1-6A0A0C4DH72 117 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 TMEM218A2RU14 115 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 C5orf49A4QMS7 147 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 CD300LBA8K4G0 201 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 M0QZK8 103 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 FCN1O00602 326 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 TAAR5O14804 337 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 CRXO43186 299 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 GCGP01275 180 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 ADCYAP1P18509 176 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RCC1P18754 421 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RPL12P30050 165 aaKnown RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 SULT1A2P50226 295 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 PPOXP50336 477 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 GPM6AP51674 278 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 PAX9P55771 341 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 HILS1P60008 231 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 S100A10P60903 97 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 FGF12P61328 243 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RND3P61587 244 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 PAFAH1B2P68402 229 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 PLGLB1Q02325 96 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 TFF3Q07654 80 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RIGQ13278 110 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 SLC10A1Q14973 349 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 HERPUD1Q15011 391 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L9Q6RFH8 374 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RPRMLQ8N4K4 120 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 OR5A2Q8NGI9 324 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 OR10G8Q8NGN5 311 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 OR1K1Q8NGR3 316 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 RTN4IP1Q8WWV3 396 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 OR5P3Q8WZ94 311 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 C2orf48Q96LS8 159 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 SUCNR1Q9BXA5 334 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 MMP26Q9NRE1 261 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 SPRR3Q9UBC9 169 aa4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 CARHSP1Q9Y2V2 147 aaKnown RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 NSD1Q96L73 2696 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-206ENST00000554353 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 IGKV1D-13A0A0B4J2D9 117 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 OR7C1O76099 320 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 ATG12O94817 140 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 CNIH1O95406 144 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 PPYP01298 95 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 APOC3P02656 99 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 TYMSP04818 313 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 SCTP09683 121 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 LINC00614P0C842 121 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 IGKV1-13P0DP09 117 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 HIST1H1EP10412 219 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 GLP1RP43220 463 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 LPAR6P43657 344 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 TFPI2P48307 235 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 FXYD4P59646 89 aa4.08□□□□□ -1.76
MTHFD1-206ENST00000554353 GUCA2BQ16661 112 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms