RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 GCNT2Q8N0V5 402 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 CIARTQ8N365 385 aaPredicted RBP4.84□□□□□ -1.63
VPS33B-203ENST00000554264 PNKDQ8N490 385 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 NAXEQ8NCW5 288 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 OR1K1Q8NGR3 316 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 SGMS2Q8NHU3 365 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 LINC01560Q8TB33 94 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 ABHD3Q8WU67 409 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM37Q8WXS4 190 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 ADTRPQ96IZ2 230 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 RNF2Q99496 336 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 VAMP8Q9BV40 100 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 OR2D2Q9H210 308 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 OR1A1Q9P1Q5 309 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 JPT1Q9UK76 154 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 HIVEP2P31629 2446 aa4.84□□□□□ -1.64
VPS33B-203ENST00000554264 CGB1A6NKQ9 187 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 HSPB6O14558 160 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 IGKV1D-33P01593 117 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 IGKV1-33P01594 117 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 NPSP0C0P6 89 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 PATE4P0C8F1 98 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 BRS3P32247 399 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 THBS3P49746 956 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 RAB7AP51149 207 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 TAS2R45P59539 299 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF90Q03938 601 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 P2RY6Q15077 328 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 COL5A1-AS1Q5SY13 56 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 FBXW9Q5XUX1 488 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 TEX38Q6PEX7 206 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 C19orf35Q6ZS72 473 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 SCCPDHQ8NBX0 429 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 NECAP1Q8NC96 275 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 OR5AU1Q8NGC0 362 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 OR2D3Q8NGH3 330 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 OR4A16Q8NH70 328 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 FGFBP3Q8TAT2 258 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 TMEM158Q8WZ71 300 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 BCL2L2Q92843 193 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-203ENST00000554264 CYYR1Q96J86 154 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 SLC35E1Q96K37 410 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 WFIKKN1Q96NZ8 548 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 QTRT1Q9BXR0 403 aaKnown RBP4.83□□□□□ -1.64
VPS33B-203ENST00000554264 COMMD5Q9GZQ3 224 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 FGF23Q9GZV9 251 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-203ENST00000554264 NPVFQ9HCQ7 196 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 OBP2BQ9NPH6 170 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 SPRR3Q9UBC9 169 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 RFNGQ9Y644 331 aa4.83□□□□□ -1.64
VPS33B-203ENST00000554264 CHD3Q12873 2000 aaKnown RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ARHGAP21Q5T5U3 1957 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 SIRPB1O00241 398 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 DLEU1O43261 78 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 NDUFB4O95168 129 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF705DP0CH99 300 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF705BP0CI00 300 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 CA6P23280 308 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 G6PCP35575 357 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 RPL29P47914 159 aaKnown RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 GNB1P62873 340 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 PMCHL1Q16048 86 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 TIGITQ495A1 244 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 CST9LP1Q5W188 147 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 PQLC2Q6ZP29 291 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 C5orf24Q7Z6I8 188 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 TUSC5Q8IXB3 177 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 SIGLECL1Q8N7X8 197 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 OR5B3Q8NH48 314 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 OR4S2Q8NH73 311 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 SMIM12Q96EX1 92 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 TBX15Q96SF7 602 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 CCL19Q99731 98 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 SNHG12Q9BXW3 62 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 MRPL32Q9BYC8 188 aaKnown RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 SAMD10Q9BYL1 202 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ENY2Q9NPA8 101 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 OSTCQ9NRP0 149 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 UQCR10Q9UDW1 63 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 IL19Q9UHD0 177 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 GOLT1BQ9Y3E0 138 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 RTTNQ86VV8 2226 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF407Q9C0G0 2248 aa4.82□□□□□ -1.64
VPS33B-203ENST00000554264 MAP1AP78559 2803 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-203ENST00000554264 ARID1AO14497 2285 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 DNAJC13O75165 2243 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 COL6A5A8TX70 2615 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 A0A1W2PPR1 153 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 A0A1W2PR80 420 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 MBD3L5A6NJ08 208 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 C15orf62A8K5M9 175 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 C12orf77C9JDV5 145 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 ISLRO14498 428 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms