RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 GDF5OSQ5U4N7 250 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 GLT8D1Q68CQ7 371 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 PLET1Q6UQ28 207 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 TMPRSS11AQ6ZMR5 421 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 RBPMS2Q6ZRY4 209 aaKnown RBP2.19□□□□□ -2.06
SLIRP-202ENST00000553981 Q6ZS49 121 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 AHSA2Q719I0 299 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 KCTD9Q7L273 389 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 SPAG16Q8N0X2 631 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 NKAIN3Q8N8D7 197 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 OR56B1Q8NGI3 324 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 OR10R2Q8NGX6 335 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 THRSPQ92748 146 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 FAM3DQ96BQ1 224 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 Q96MT0 163 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 SPIN2AQ99865 258 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 SPIN2BQ9BPZ2 258 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 C20orf24Q9BUV8 137 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 RNF126Q9BV68 326 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 MS4A6AQ9H2W1 248 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 HRH4Q9H3N8 390 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 VSIRQ9H7M9 311 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 C12orf4Q9NQ89 552 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 NDUFA4L2Q9NRX3 87 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 PLCXD1Q9NUJ7 323 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 BET1LQ9NYM9 111 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 TAS2R8Q9NYW2 309 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 DEFB131BA0A096LNP1 70 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TRBV7-1A0A0A6YYK4 115 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TRAV10A0A0B4J240 114 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM235A6NFC5 223 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 CBY3A6NI87 242 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 KRTAP16-1A8MUX0 517 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 C16orf90A8MZG2 172 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 SULT1C2O00338 296 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 DENRO43583 198 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 IFNA4P05014 189 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 SERPINE2P07093 398 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 UBBP0CG47 229 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 PRB4P10163 310 aaPredicted RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 RRASP10301 218 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 HIST1H1DP16402 221 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 PSMD7P51665 324 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TCTAP57738 103 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 FXYD7P58549 80 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 RPL8P62917 257 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 HAMPP81172 84 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM187Q14656 261 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 RTL8BQ17RB0 113 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 ANKRD55Q3KP44 614 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 HSD17B12Q53GQ0 312 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 LIPKQ5VXJ0 399 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 SLC25A24Q6NUK1 477 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF818PQ6ZRF7 136 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TCF24Q7RTU0 167 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 C1orf158Q8N1D5 194 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM116Q8NCL8 245 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 BPIFB6Q8NFQ5 453 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 OR5H6Q8NGV6 325 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 OR4A5Q8NH83 315 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 OR10J5Q8NHC4 309 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 ZNRF2Q8NHG8 242 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 VN1R17PQ8TDU5 208 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 DCANP1Q8TF63 244 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 TCTEX1D2Q8WW35 142 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 PHYHIPQ92561 330 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 MARC2Q969Z3 335 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 MRPL48Q96GC5 212 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 DCUN1D5Q9BTE7 237 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 C9orf16Q9BUW7 83 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 RIMS4Q9H426 269 aaPredicted RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 FNDC4Q9H6D8 234 aaPredicted RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 RNF167Q9H6Y7 350 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 DAZ1Q9NQZ3 744 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 SMPD3Q9NY59 655 aaPredicted RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 C21orf62Q9NYP8 219 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 CKLFQ9UBR5 152 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 UFC1Q9Y3C8 167 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 OR2W1Q9Y3N9 320 aa2.18□□□□□ -2.06
SLIRP-202ENST00000553981 F11RQ9Y624 299 aaKnown RBP2.18□□□□□ -2.06
SLIRP-202ENST00000553981 A0A0G2JRQ6 117 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 PLAC8L1A1L4L8 177 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 MEIS3P1A6NDR6 274 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 OR4C46A6NHA9 309 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SNTNA6NMZ2 147 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 C15orf62A8K5M9 175 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF705FA8MVS1 300 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 C11orf94C9JXX5 98 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF688P0C7X2 276 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF705DP0CH99 300 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF705BP0CI00 300 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 OR13C7P0DN81 318 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 MYL12AP19105 171 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 CALRP27797 417 aaKnown RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 GNRHRP30968 328 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 G6PCP35575 357 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 TGFBR1P36897 503 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SERPINB10P48595 397 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms