RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 HBE1P02100 147 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 M6PRP20645 277 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 FGF7P21781 194 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
PABPN1-203ENST00000553960 TMEM41BQ5BJD5 291 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 NECAP1Q8NC96 275 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 C22orf15Q8WYQ4 148 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 RNF2Q99496 336 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 HSPB9Q9BQS6 159 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 RPRMQ9NS64 109 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
PABPN1-203ENST00000553960 SONP18583 2426 aaKnown RBP8.55□□□□□ -1.04
PABPN1-203ENST00000553960 IGKV1D-37A0A075B6S9 117 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 UBE2L5PA0A1B0GUS4 154 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 PSMB11A5LHX3 300 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 AGPAT2O15120 278 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 TSPAN15O95858 294 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 IGLV1-40P01703 118 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 OPN1MWP04001 364 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 FABP1P07148 127 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 LINC00869P0C866 280 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 OPN1MW2P0DN77 364 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 OPN1MW3P0DN78 364 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 PAX6P26367 422 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 YPEL3P61236 119 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-203ENST00000553960 ACOT6Q3I5F7 207 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-203ENST00000553960 AKR1C8PQ5T2L2 129 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 SLC25A24Q6NUK1 477 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 BCL6BQ8N143 479 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-203ENST00000553960 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
PABPN1-203ENST00000553960 GATAD1Q8WUU5 269 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 SH3BGRL3Q9H299 93 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 CDC42EP3Q9UKI2 254 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 ARL2-SNX15V9GYD0 113 aa8.54□□□□□ -1.04
PABPN1-203ENST00000553960 ZNF469Q96JG9 3925 aaPredicted RBP8.53□□□□□ -1.04
PABPN1-203ENST00000553960 IGHV3OR16-10A0A075B7F0 116 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 TRAV41A0A0B4J266 112 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 MFSD2BA6NFX1 497 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 ZNF705EA8MWA4 302 aaPredicted RBP8.53□□□□□ -1.04
PABPN1-203ENST00000553960 TEX46H3BTG2 121 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 CLN5O75503 358 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 MT-CO2P00403 227 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 IGHV4-59P01825 116 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 IGHG4P01861 327 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 NPBWR1P48145 328 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 GNB1P62873 340 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 RUNX1Q01196 453 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 SLC35E3Q7Z769 313 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 RBMXL1Q96E39 390 aaKnown RBP8.53□□□□□ -1.04
PABPN1-203ENST00000553960 SCRT1Q9BWW7 348 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 NPFFR1Q9GZQ6 430 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 SLC39A9Q9NUM3 307 aa8.53□□□□□ -1.04
PABPN1-203ENST00000553960 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
PABPN1-203ENST00000553960 TRBV7-1A0A0A6YYK4 115 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 CTXND1A0A1B0GTU2 59 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 SCGB2A1O75556 95 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 YIF1AO95070 293 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 OR5G3P0C626 314 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 DEFA4P12838 97 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 MFAP4P55083 255 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 AKR1C1Q04828 323 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 FAM74A1Q5RGS3 127 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 SPSB3Q6PJ21 355 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 MYOZ3Q8TDC0 251 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 RCC1LQ96I51 464 aaKnown RBP8.52□□□□□ -1.05
PABPN1-203ENST00000553960 TXNDC17Q9BRA2 123 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 MRPL32Q9BYC8 188 aaKnown RBP8.52□□□□□ -1.05
PABPN1-203ENST00000553960 PRSS22Q9GZN4 317 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 RNF24Q9Y225 148 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 PXMP4Q9Y6I8 212 aa8.52□□□□□ -1.05
PABPN1-203ENST00000553960 MTORP42345 2549 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
PABPN1-203ENST00000553960 OR2C1O95371 312 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 CD5P06127 495 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 S100A1P23297 94 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 PPT1P50897 306 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 RND2P52198 227 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 B2MP61769 119 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 ACSM6Q6P461 480 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 UNQ5815/PRO19632Q6UWF5 114 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 Q6ZRG5 221 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 CYP2G1PQ6ZSU1 146 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 S100A7AQ86SG5 101 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 TMEM219Q86XT9 240 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 ZNF502Q8TBZ5 544 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 NPIPB3Q92617 1050 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms