RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PGLYRP3Q96LB9 341 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 HYLS1Q96M11 299 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DERL3Q96Q80 235 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR4K3Q96R72 315 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 LYSMD1Q96S90 227 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 GPER1Q99527 375 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 MIEN1Q9BRT3 115 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 C1QTNF6Q9BXI9 259 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 SMIM3Q9BZL3 60 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR8D2Q9GZM6 311 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 Q9H521 79 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CXorf21Q9HAI6 301 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CBLN4Q9NTU7 201 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ACER3Q9NUN7 267 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 RBM22Q9NW64 420 aaKnown RBP eCLIP1.38□□□□□ -2.197e-6■■■■□ 24.6
VRK1-202ENST00000553683 OR5AC2Q9NZP5 309 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 COMMD3Q9UBI1 195 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ANXA10Q9UJ72 324 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 POLR1DQ9Y2S0 133 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.38□□□□□ -2.19
VRK1-202ENST00000553683 PCYT1BQ9Y5K3 369 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 CDH23Q9H251 3354 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PSME4Q14997 1843 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PXDNLA1KZ92 1463 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CCDC88BA6NC98 1476 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 MAGI2Q86UL8 1455 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 NEO1Q92859 1461 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 DNMT1P26358 1616 aaKnown RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ROBO3Q96MS0 1386 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 MAP1BP46821 2468 aaKnown RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 CROCC2H7BZ55 1655 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ITSN2Q9NZM3 1697 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 A0A0G2JMM0 328 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 LOC107984640A0A0U1RRK4 108 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 FAM240AA0A1B0GVK7 77 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 A0A1W2PPB8 328 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 hADV38S2A0JD32 116 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 TMEM212A6NML5 194 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 KIR3DP1A8MWS1 328 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SMKR1H3BMG3 65 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 LY6LH3BQJ8 138 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 M0R2Z0 102 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SNAPC5O75971 98 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 EPPINO95925 133 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CFDP00746 253 aaPredicted RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 IGHMP01871 453 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SHBGP04278 402 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 HLA-DQB2P05538 268 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 IGLC1P0CG04 106 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 PGA4P0DJD7 388 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 PGA3P0DJD8 388 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 LINC00694P0DN24 101 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CD99P14209 185 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CPMP14384 443 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ATF1P18846 271 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CXCL2P19875 107 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CXCL3P19876 107 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 GNG4P50150 75 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 AKR1C2P52895 323 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ARPP19P56211 112 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SNRPD2P62316 118 aaKnown RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 SLC35A2P78381 396 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 RPL18AQ02543 176 aaKnown RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 ZNF266Q14584 549 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 PEA15Q15121 130 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 KHDC3LQ587J8 217 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 FAM201AQ5SY85 155 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 BCL2L15Q5TBC7 163 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 GLT8D1Q68CQ7 371 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR2T5Q6IEZ7 315 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 GUSBP11Q6P575 273 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 HRCT1Q6UXD1 115 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ZNF550Q7Z398 422 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OOSP2Q86WS3 158 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 TMEM86AQ8N2M4 240 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SVBPQ8N300 66 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 KRTCAP2Q8N6L1 136 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 BPIFB6Q8NFQ5 453 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR11G2Q8NGC1 345 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR2T29Q8NH02 315 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR10D3Q8NH80 312 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 TMEM230Q96A57 120 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ADAT3Q96EY9 351 aaPredicted RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 DCUN1D1Q96GG9 259 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 FAM19A4Q96LR4 140 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 YPEL4Q96NS1 127 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR2M4Q96R27 311 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 LINC01587Q99440 93 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SDF2Q99470 211 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 NAA38Q9BRA0 125 aaKnown RBP1.37□□□□□ -2.19
VRK1-202ENST00000553683 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 GNB1LQ9BYB4 327 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SAMD10Q9BYL1 202 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OR2H1Q9GZK4 316 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ZNF442Q9H7R0 627 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 HES4Q9HCC6 221 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms