RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PRSS22Q9GZN4 317 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 EIF5A2Q9GZV4 153 aaKnown RBP12.66□□□□□ -0.38
ACTN1-209ENST00000553659 PITPNC1Q9UKF7 332 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 BUB1B-PAK6H3BSN5 160 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 AGPAT2O15120 278 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 IFNA1P01562 189 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 IFNA4P05014 189 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 MAS1LP35410 378 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 TAGLN2P37802 199 aaKnown RBP12.65□□□□□ -0.38
ACTN1-209ENST00000553659 ERHP84090 104 aaKnown RBP12.65□□□□□ -0.38
ACTN1-209ENST00000553659 RAB31Q13636 194 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 ACOT6Q3I5F7 207 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-209ENST00000553659 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 TMEM219Q86XT9 240 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 OR11H6Q8NGC7 330 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 RPEQ96AT9 228 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
ACTN1-209ENST00000553659 TEX50A0A1B0GTY4 177 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
ACTN1-209ENST00000553659 ODF3BA8MYP8 253 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 NDUFS6O75380 124 aaKnown RBP12.64□□□□□ -0.39
ACTN1-209ENST00000553659 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 SSX2Q16385 188 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 SPSB3Q6PJ21 355 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 NPVFQ9HCQ7 196 aa12.64□□□□□ -0.39
ACTN1-209ENST00000553659 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 PRSS46E5RG02 174 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 CYB5BO43169 146 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 REG1BP48304 166 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
ACTN1-209ENST00000553659 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 LDLRAD2Q5SZI1 272 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 Q6ZS46 218 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 OR4P4Q8NGL7 312 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-209ENST00000553659 ACTR3CQ9C0K3 210 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-209ENST00000553659 SLC35B3Q9H1N7 401 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 RPRMQ9NS64 109 aa12.63□□□□□ -0.39
ACTN1-209ENST00000553659 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 CTXND1A0A1B0GTU2 59 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 RRHO14718 337 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 HSPB1P04792 205 aaKnown RBP12.62□□□□□ -0.39
ACTN1-209ENST00000553659 CD33P20138 364 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 HTR1DP28221 377 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 OPRK1P41145 380 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 BLCAPP62952 87 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
ACTN1-209ENST00000553659 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 ARSJQ5FYB0 599 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-209ENST00000553659 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 MMD2Q8IY49 270 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 OR10G4Q8NGN3 311 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 TMEM231Q9H6L2 316 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 NDUFA4L2Q9NRX3 87 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 SLC39A9Q9NUM3 307 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 DPM3Q9P2X0 92 aa12.62□□□□□ -0.39
ACTN1-209ENST00000553659 SMCO3A2RU48 225 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 CA2P00918 260 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 ADCYAP1P18509 176 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 PPT1P50897 306 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 TPTE2P1Q5T6R2 138 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 CCDC144NLQ6NUI1 221 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
ACTN1-209ENST00000553659 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
ACTN1-209ENST00000553659 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 IGLL1P15814 213 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 GPX4P36969 197 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-209ENST00000553659 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-209ENST00000553659 MINOS1Q5TGZ0 78 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 TEPPQ6URK8 271 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 MOB3BQ86TA1 216 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 OR5AU1Q8NGC0 362 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 OR10G9Q8NGN4 311 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 OR10G7Q8NGN6 311 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 RNASEH2CQ8TDP1 164 aaKnown RBP12.6□□□□□ -0.39
ACTN1-209ENST00000553659 P2RX4Q99571 388 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 HILPDAQ9Y5L2 63 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 MINOS1-NBL1R4GNA1 71 aa12.6□□□□□ -0.39
ACTN1-209ENST00000553659 A0A1W2PRX2 142 aa12.59□□□□□ -0.39
ACTN1-209ENST00000553659 ACTL6BO94805 426 aa12.59□□□□□ -0.39
ACTN1-209ENST00000553659 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
ACTN1-209ENST00000553659 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
ACTN1-209ENST00000553659 SRSF8Q9BRL6 282 aaKnown RBP12.59□□□□□ -0.39
ACTN1-209ENST00000553659 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
ACTN1-209ENST00000553659 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms