RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SGMS2Q8NHU3 365 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 PIFOQ8TCI5 191 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 RNASEH2CQ8TDP1 164 aaKnown RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 CACNG8Q8WXS5 425 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 ARPC1AQ92747 370 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 NEU1Q99519 415 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF471Q9BX82 626 aaPredicted RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 NPFFR1Q9GZQ6 430 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 C11orf1Q9H5F2 150 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SLA2Q9H6Q3 261 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 NPVFQ9HCQ7 196 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 DKK2Q9UBU2 259 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 VPREB3Q9UKI3 123 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 CSPG4Q6UVK1 2322 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 ABCA2Q9BZC7 2435 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 TRAV30A0A087WSZ9 112 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 IGHV7-81A0A0B4J1V7 117 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 RNF222A6NCQ9 220 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 NPIPB5A8MRT5 1133 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 C17orf112F2Z3M2 114 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 G3V3Q6 166 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 CLDN34H7C241 214 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 TRIM77I1YAP6 450 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 AP4M1O00189 453 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 BCL2L11O43521 198 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 MPDU1O75352 247 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 IFNA7P01567 189 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 IGHG2P01859 326 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 CRYGCP07315 174 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 METTL15P1P0C7V9 234 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 RNASE2P10153 161 aaKnown RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 CXCL2P19875 107 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 PAX6P26367 422 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 NKX2-5P52952 324 aaPredicted RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 UBA52P62987 128 aaKnown RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 SLC38A11Q08AI6 406 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 PJVKQ0ZLH3 352 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 FOXI1Q12951 378 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM95Q3KNT9 176 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 SPINK9Q5DT21 86 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 OR8G2PQ6IF36 304 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 UNQ5815/PRO19632Q6UWF5 114 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 STPG2Q8N412 459 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 C9orf62Q8N4C0 152 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 SIGLECL1Q8N7X8 197 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF709Q8N972 641 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF114Q8NC26 417 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 OR5C1Q8NGR4 320 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 OR1P1Q8NH06 330 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 LRRC20Q8TCA0 184 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 C22orf15Q8WYQ4 148 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 GNPNAT1Q96EK6 184 aaPredicted RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 PHYHIPLQ96FC7 376 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 SLC35E1Q96K37 410 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 ATP5SQ99766 215 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM147Q9BVK8 224 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 PARD6GQ9BYG4 376 aaPredicted RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 GAR1Q9NY12 217 aaKnown RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF580Q9UK33 172 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 F11RQ9Y624 299 aaKnown RBP3.95□□□□□ -1.78
VTI1B-202ENST00000553619 PLXNB1O43157 2135 aa3.95□□□□□ -1.78
VTI1B-202ENST00000553619 TRAV41A0A0B4J266 112 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 IGLC7A0M8Q6 106 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 IGSF23A1L1A6 192 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM89A2RUT3 159 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 C15orf62A8K5M9 175 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TEX22C9J3V5 150 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 E7EUB6 86 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 H3BP45 60 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 H3BUA1 57 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 CST7O76096 145 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 BRI3O95415 125 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM50AO95807 157 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 IGHV4-59P01825 116 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 IGF1P05019 195 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FABP1P07148 127 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 NPBWR1P48145 328 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 CRIP2P52943 208 aaPredicted RBP3.94□□□□□ -1.78
VTI1B-202ENST00000553619 RIPPLY3P57055 190 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 RAB4BP61018 213 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 SLC35B1P78383 322 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 WT1-ASQ06250 92 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 MRGPRG-AS1Q2M3A8 158 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 BSXQ3C1V8 233 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FAM209BQ5JX69 171 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 LAMTOR1Q6IAA8 161 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF767PQ75MW2 155 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM144Q7Z5S9 345 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 S100A7AQ86SG5 101 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM219Q86XT9 240 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 BAP18Q8IXM2 172 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM217Q8N7C4 229 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.94□□□□□ -1.78
VTI1B-202ENST00000553619 UBAC2Q8NBM4 344 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 LFNGQ8NES3 379 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 OR10W1Q8NGF6 305 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FAM110DQ8TAY7 271 aaPredicted RBP3.94□□□□□ -1.78
VTI1B-202ENST00000553619 CXorf58Q96LI9 332 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF48Q96MX3 618 aaPredicted RBP3.94□□□□□ -1.78
VTI1B-202ENST00000553619 OR4C12Q96R67 309 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms