RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OR5AC1P0C628 307 aa8.79□□□□□ -1
SRP54-203ENST00000553544 FCGR2BP31994 310 aaPredicted RBP8.79□□□□□ -1
SRP54-203ENST00000553544 BMI1P35226 326 aa8.79□□□□□ -1
SRP54-203ENST00000553544 ADMP35318 185 aa8.79□□□□□ -1
SRP54-203ENST00000553544 UBE2MP61081 183 aaKnown RBP8.79□□□□□ -1
SRP54-203ENST00000553544 IZUMO4Q1ZYL8 232 aa8.79□□□□□ -1
SRP54-203ENST00000553544 ANKRD55Q3KP44 614 aa8.79□□□□□ -1
SRP54-203ENST00000553544 TMEM128Q5BJH2 165 aa8.79□□□□□ -1
SRP54-203ENST00000553544 LYG2Q86SG7 212 aa8.79□□□□□ -1
SRP54-203ENST00000553544 OR52B4Q8NGK2 314 aa8.79□□□□□ -1
SRP54-203ENST00000553544 TMEM190Q8WZ59 177 aa8.79□□□□□ -1
SRP54-203ENST00000553544 RTBDNQ9BSG5 229 aaPredicted RBP8.79□□□□□ -1
SRP54-203ENST00000553544 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
SRP54-203ENST00000553544 WDR12Q9GZL7 423 aaKnown RBP8.79□□□□□ -1
SRP54-203ENST00000553544 ENY2Q9NPA8 101 aa8.79□□□□□ -1
SRP54-203ENST00000553544 DUXBA0A1W2PPF3 345 aa8.78□□□□□ -1
SRP54-203ENST00000553544 A6NHS1 94 aa8.78□□□□□ -1
SRP54-203ENST00000553544 NDUFA4O00483 81 aa8.78□□□□□ -1
SRP54-203ENST00000553544 SPRY2O43597 315 aa8.78□□□□□ -1
SRP54-203ENST00000553544 CDS2O95674 445 aa8.78□□□□□ -1
SRP54-203ENST00000553544 CTSGP08311 255 aa8.78□□□□□ -1
SRP54-203ENST00000553544 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
SRP54-203ENST00000553544 ERHP84090 104 aaKnown RBP8.78□□□□□ -1
SRP54-203ENST00000553544 EWSR1Q01844 656 aaKnown RBP eCLIP8.78□□□□□ -1
SRP54-203ENST00000553544 SP6Q3SY56 376 aa8.78□□□□□ -1
SRP54-203ENST00000553544 PVRIGQ6DKI7 326 aa8.78□□□□□ -1
SRP54-203ENST00000553544 Q6ZWC4 215 aa8.78□□□□□ -1
SRP54-203ENST00000553544 TMEM217Q8N7C4 229 aa8.78□□□□□ -1
SRP54-203ENST00000553544 SLC35G3Q8N808 338 aa8.78□□□□□ -1
SRP54-203ENST00000553544 TP53TG1Q9Y2A0 90 aa8.78□□□□□ -1
SRP54-203ENST00000553544 UFC1Q9Y3C8 167 aa8.78□□□□□ -1
SRP54-203ENST00000553544 SELENOKQ9Y6D0 94 aa8.78□□□□□ -1
SRP54-203ENST00000553544 TRAV25A0A0B4J276 109 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 A0A0G2JRQ6 117 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 K7EMT4 169 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 AKR1C4P17516 323 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 AARDQ4LEZ3 155 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 BTNL8Q6UX41 500 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 Q6ZRM9 215 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 TMED4Q7Z7H5 227 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 LGI3Q8N145 548 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 CENPSQ8N2Z9 138 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 GLYATL2Q8WU03 294 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 TXN2Q99757 166 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 HECTD4Q9Y4D8 3996 aa8.77□□□□□ -1.01
SRP54-203ENST00000553544 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 CORTO00230 105 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 UBE2CO00762 179 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 SCGB2A1O75556 95 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 MT-CO2P00403 227 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 IFNA17P01571 189 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 IL7P13232 177 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 SUB1P53999 127 aaKnown RBP eCLIP8.76□□□□□ -1.01
SRP54-203ENST00000553544 APOC4P55056 127 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 MFAP4P55083 255 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 Q56UQ5 140 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 LHFPL5Q8TAF8 219 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 PHLDA1Q8WV24 401 aaPredicted RBP8.76□□□□□ -1.01
SRP54-203ENST00000553544 MISP3Q96FF7 219 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
SRP54-203ENST00000553544 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
SRP54-203ENST00000553544 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
SRP54-203ENST00000553544 A0A0B4J2A0 478 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 C15orf62A8K5M9 175 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 SCAF4O95104 1147 aaKnown RBP8.75□□□□□ -1.01
SRP54-203ENST00000553544 VAMP1P23763 118 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 SNCAP37840 140 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 HOXA1P49639 335 aaPredicted RBP8.75□□□□□ -1.01
SRP54-203ENST00000553544 ZNF846Q147U1 533 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 BAK1Q16611 211 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 MZT2BQ6NZ67 158 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 UBAC2Q8NBM4 344 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 OR52E5Q8NH55 327 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 OR10C1Q96KK4 312 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 SHPKQ9UHJ6 478 aa8.75□□□□□ -1.01
SRP54-203ENST00000553544 TSPAN4O14817 238 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 NUPL2O15504 423 aaKnown RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 LYRM1O43325 122 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 NDUFB6O95139 128 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 SULT1A3P0DMM9 295 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 SULT1A4P0DMN0 295 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 RNASE2P10153 161 aaKnown RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 CCR6P51684 374 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 SPCS3P61009 180 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 RELQ04864 619 aaPredicted RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 TMEM187Q14656 261 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 RBPMS2Q6ZRY4 209 aaKnown RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 STPG3Q8N7X2 389 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 COQ8AQ8NI60 647 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 TMEM230Q96A57 120 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 SPAG8Q99932 426 aaPredicted RBP8.74□□□□□ -1.01
SRP54-203ENST00000553544 C20orf24Q9BUV8 137 aa8.74□□□□□ -1.01
SRP54-203ENST00000553544 IGHV3OR16-8A0A075B7F1 116 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms