RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 RNF24Q9Y225 148 aa5.83□□□□□ -1.48
ATXN3-221ENST00000553498 PUS1Q9Y606 427 aaKnown RBP eCLIP5.83□□□□□ -1.48
ATXN3-221ENST00000553498 TANC2Q9HCD6 1990 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 NPIPB5A8MRT5 1133 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 ZNF727A8MUV8 499 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 C11orf94C9JXX5 98 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 E7EUB6 86 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 NDUFS7O75251 213 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 CNIH1O95406 144 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 C8orf88P0DMB2 117 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 CD99P14209 185 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 SLC25A16P16260 332 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 CTRB1P17538 263 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 GCHFRP30047 84 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 PLP1P60201 277 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 LCN2P80188 198 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 FLI1Q01543 452 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-221ENST00000553498 PAX8Q06710 450 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 CTRB2Q6GPI1 263 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 ZNF843Q8N446 348 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 ABHD5Q8WTS1 349 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 SSMEM1Q8WWF3 244 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 ACY3Q96HD9 319 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 BTF3L4Q96K17 158 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 ZNF48Q96MX3 618 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-221ENST00000553498 UHRF2Q96PU4 802 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 SMIM7Q9BQ49 75 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 FBXL15Q9H469 300 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 SDF2L1Q9HCN8 221 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 DNAJC4Q9NNZ3 241 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 THYN1Q9P016 225 aa5.82□□□□□ -1.48
ATXN3-221ENST00000553498 DYSFO75923 2080 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 NCOR2Q9Y618 2525 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 IGKV1OR2-108A0A075B7D4 117 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TRAV30A0A087WSZ9 112 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 COLCA2A8K830 154 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 PAGE4O60829 102 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 HLA-DRB1P01911 266 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 ARL14EPLP0DKL9 152 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 COX6B1P14854 86 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 HIST1H1BP16401 226 aaKnown RBP5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TMEM11P17152 192 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 S100A7P31151 101 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 ATP5J2P56134 94 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 GNB1P62873 340 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 HES1Q14469 280 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 KLK9Q2XQG4 91 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 C10orf55Q5SWW7 151 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 LDLRAD2Q5SZI1 272 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 FAM78BQ5VT40 261 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TMEM88Q6PEY1 159 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 CBLN2Q8IUK8 224 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 IQCF2Q8IXL9 164 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TTC9CQ8N5M4 171 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 OR4F5Q8NH21 305 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 OR4X1Q8NH49 305 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 OR2T6Q8NHC8 308 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 NPIPB3Q92617 1050 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 C11orf52Q96A22 123 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 OR4F4Q96R69 305 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TBX15Q96SF7 602 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 SLC25A33Q9BSK2 321 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 FNDC4Q9H6D8 234 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-221ENST00000553498 SEPSECSQ9HD40 501 aaKnown RBP5.81□□□□□ -1.48
ATXN3-221ENST00000553498 TNFRSF19Q9NS68 423 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 KLK9Q9UKQ9 250 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 HILPDAQ9Y5L2 63 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 LY96Q9Y6Y9 160 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 ESPL1Q14674 2120 aa5.81□□□□□ -1.48
ATXN3-221ENST00000553498 ANKHD1Q8IWZ3 2542 aaKnown RBP5.81□□□□□ -1.48
ATXN3-221ENST00000553498 MAP1BP46821 2468 aaKnown RBP5.81□□□□□ -1.48
ATXN3-221ENST00000553498 KALRNO60229 2985 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 PSMB11A5LHX3 300 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 CLDN34H7C241 214 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 I3L2K1 104 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 PPP1R2P9O14990 202 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 NPFFO15130 113 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 HMGB3O15347 200 aaKnown RBP5.8□□□□□ -1.48
ATXN3-221ENST00000553498 NUPL2O15504 423 aaKnown RBP5.8□□□□□ -1.48
ATXN3-221ENST00000553498 COX7A2P2O60397 106 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 OR2C1O95371 312 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 DEFA4P12838 97 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 CNTFRP26992 372 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 FCGR2BP31994 310 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-221ENST00000553498 RND2P52198 227 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 CEBPGP53567 150 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 KLRD1Q13241 179 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 FXYD3Q14802 87 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 GCSAMLQ5JQS6 135 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 C10orf113Q5VZT2 155 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 CST9LP1Q5W188 147 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 LHFPL4Q7Z7J7 247 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 ARPC1AQ92747 370 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 PERPQ96FX8 193 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 ATP6V0BQ99437 205 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 TXN2Q99757 166 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 PARLQ9H300 379 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 TMPRSS5Q9H3S3 457 aa5.8□□□□□ -1.48
ATXN3-221ENST00000553498 MLXQ9UH92 298 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms