RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 OR4D10Q8NGI6 311 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 OR1N2Q8NGR9 330 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 OR4A16Q8NH70 328 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 TERB2Q8NHR7 220 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 CD300LFQ8TDQ1 290 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 COMMD5Q9GZQ3 224 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 SDF2L1Q9HCN8 221 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 RABL2AQ9UBK7 228 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 RABL2BQ9UNT1 228 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 FOXA2Q9Y261 457 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-220ENST00000553491 VSIG4Q9Y279 399 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 NSG2Q9Y328 171 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 S4R3C0 116 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 PKD1L1Q8TDX9 2849 aa3.61□□□□□ -1.83
ATXN3-220ENST00000553491 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 TRAV3A0A0B4J244 114 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 C3orf85A0A1B0GTC6 90 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 CREBL2O60519 120 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 KBTBD11O94819 623 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 S1PR2O95136 353 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 IGHG4P01861 327 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 IGF1P05019 195 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 CRYGBP07316 175 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 OR9G9P0C7N8 305 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 F2RP25116 425 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 MYCNOSP40205 109 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 RPL27AP46776 148 aaKnown RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 BCAP31P51572 246 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 PIGPP57054 158 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 RPL8P62917 257 aaKnown RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 OXA1LQ15070 435 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 AKIRIN2Q53H80 203 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 C10orf55Q5SWW7 151 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 Q8N402 240 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF491Q8N8L2 437 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 OR51S1Q8NGJ8 323 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 VSTM2AQ8TAG5 236 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 SRSF12Q8WXF0 261 aaKnown RBP3.6□□□□□ -1.83
ATXN3-220ENST00000553491 SPIN2AQ99865 258 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 SPIN2BQ9BPZ2 258 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 FXYD6Q9H0Q3 95 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 GNB4Q9HAV0 340 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 SCP2D1Q9UJQ7 156 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 KCNIP3Q9Y2W7 256 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 OR51B2Q9Y5P1 312 aa3.6□□□□□ -1.83
ATXN3-220ENST00000553491 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 A0A0G2JLM5 398 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 CENPXA8MT69 81 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SEC14L6B5MCN3 397 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 UPK2O00526 184 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 CTDSPLO15194 276 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR2J3O76001 311 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ATG12O94817 140 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 DHFRP00374 187 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 IFNA17P01571 189 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 APOHP02749 345 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-220ENST00000553491 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
ATXN3-220ENST00000553491 PRSS1P07477 247 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TRAPPC2P0DI81 140 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TRAPPC2BP0DI82 140 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 HLA-GP17693 338 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 PSMB8P28062 276 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 MAS1LP35410 378 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 AKR1C2P52895 323 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TAS2R31P59538 309 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 AP3S2P59780 193 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR2B8PP59922 312 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 RHOGP84095 191 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 NDPQ00604 133 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF45Q02386 682 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TATDN3Q17R31 274 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SPINK9Q5DT21 86 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 VAX1Q5SQQ9 334 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TMED4Q7Z7H5 227 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SLC25A42Q86VD7 318 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms