RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LSM10Q969L4 123 aaKnown RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 NDUFAF3Q9BU61 184 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 NXF2Q9GZY0 626 aaKnown RBP5.2□□□□□ -1.58
ATXN3-219ENST00000553488 PLEKHA2Q9HB19 425 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 COMMD9Q9P000 198 aa5.2□□□□□ -1.58
ATXN3-219ENST00000553488 IGLV2-18A0A075B6J9 118 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 TRGV11A0A075B6L2 103 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 TRAV14DV4A0A0A6YYC5 116 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 TRAV1-2A0A0B4J238 106 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 METTL21EPA6NDL7 271 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 PTGES3LE9PB15 166 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 PPYP01298 95 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 CD5P06127 495 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 HSMCR30P0CW71 290 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 PTHLHP12272 177 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 FCGR2CP31995 323 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 CATR1Q13166 79 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 ZNF818PQ6ZRF7 136 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 STHQ8IWL8 128 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 DMBX1Q8NFW5 382 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 OR1P1Q8NH06 330 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 OR51H1Q8NH63 302 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 CMTM3Q96MX0 182 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 ATG5Q9H1Y0 275 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 ACOT13Q9NPJ3 140 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 CLEC5AQ9NY25 188 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 TBC1D24Q9ULP9 559 aa5.19□□□□□ -1.58
ATXN3-219ENST00000553488 C16orf90A8MZG2 172 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 K7EQG2 157 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 PDCD5O14737 125 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 ST8SIA3O43173 380 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 YIF1AO95070 293 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 PAFAH1B2P68402 229 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 OGFRL1Q5TC84 451 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-219ENST00000553488 TOMM20LQ6UXN7 152 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 CADM3Q8N126 398 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 ZNF114Q8NC26 417 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 GRAMD2BQ96HH9 432 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 DUSP21Q9H596 190 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 TMEM14BQ9NUH8 114 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 NSG2Q9Y328 171 aa5.18□□□□□ -1.58
ATXN3-219ENST00000553488 IGHV3-66A0A0C4DH42 116 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 KNCNA6PVL3 124 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 DNASE2O00115 360 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-219ENST00000553488 MT-CO2P00403 227 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 IGHV3-48P01763 117 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 RAB3BP20337 219 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 MFAP4P55083 255 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 GNG2P59768 71 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 AADACL3Q5VUY0 350 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 UBE2UQ5VVX9 321 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 BEST4Q8NFU0 473 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 DCANP1Q8TF63 244 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 SLC25A46Q96AG3 418 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 MGLLQ99685 303 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 TXN2Q99757 166 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 GINS3Q9BRX5 216 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 C1orf43Q9BWL3 253 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 HINT2Q9BX68 163 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 SLC5A7Q9GZV3 580 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 OR51B2Q9Y5P1 312 aa5.17□□□□□ -1.58
ATXN3-219ENST00000553488 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 A0A1B0GU03 582 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 SMIM30A4D0T7 59 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 CASQ2O14958 399 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-219ENST00000553488 RGS10O43665 173 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 GNG7O60262 68 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 IFNA10P01566 189 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 RLN1P04808 185 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 EIF4EP06730 217 aaKnown RBP5.16□□□□□ -1.58
ATXN3-219ENST00000553488 ZNF688P0C7X2 276 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 MYL9P24844 172 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 F2RP25116 425 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 GNRHRP30968 328 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 G6PCP35575 357 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 FXYD4P59646 89 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 ARPC4P59998 168 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 ERVK-16P61578 105 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 RNF212Q495C1 297 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 SOHLH1Q5JUK2 328 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 ZNF705AQ6ZN79 300 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-219ENST00000553488 TMEM17Q86X19 198 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 HOGA1Q86XE5 327 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 UBE2DNLQ8IWF7 75 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 DUSP18Q8NEJ0 188 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 FCAMRQ8WWV6 532 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 NDUFB11Q9NX14 153 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 SCN3BQ9NY72 215 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 RABAC1Q9UI14 185 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 PUS1Q9Y606 427 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-219ENST00000553488 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
ATXN3-219ENST00000553488 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-219ENST00000553488 A0A087WWL8 130 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 TRDV1A0A1B0GX56 115 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 SCGNO76038 276 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 PRCDQ00LT1 54 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 RCN1Q15293 331 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 TBCEQ15813 527 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-219ENST00000553488 ACTL10Q5JWF8 245 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms