RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 C15orf65H3BRN8 121 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 M0R2Z0 102 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SNAI2O43623 268 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SAP30O75446 220 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MMP23AO75900 390 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 NUDT3O95989 172 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MFAP2P55001 183 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TBR1Q16650 682 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SMIM21Q3B7S5 101 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SLC35E4Q6ICL7 350 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 Q8IYB0 196 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 CD177Q8N6Q3 437 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TCTEX1D1Q8N7M0 179 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 NUP35Q8NFH5 326 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 OR8B3Q8NGG8 313 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 BORCS7Q96B45 105 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SARAFQ96BY9 339 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 OR8B2Q96RD0 313 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TMEM140Q9NV12 185 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SPRR3Q9UBC9 169 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 DSCAMO60469 2012 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PIGBOS1A0A0B4J2F0 54 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 M0R296 226 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 OR7C2O60412 319 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 SMPD2O60906 423 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 AREGP15514 252 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 NPY1RP25929 384 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 TMPRSS3P57727 454 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 NRN1LQ496H8 165 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 PRR27Q6MZM9 219 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 ZNRF1Q8ND25 227 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 OR9G1Q8NH87 305 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 MBD6Q96DN6 1003 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 LINC00470Q9BZP3 86 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 NPVFQ9HCQ7 196 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 WASHC3Q9Y3C0 194 aa3.96□□□□□ -1.77
LIMA1-214ENST00000552783 ATRXP46100 2492 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 A0A087X0K7 114 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TRBV9A0A0B4J1U6 114 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TRAV8-6A0A0B4J262 113 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 OOEPA6NGQ2 149 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 H0Y8G0 127 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 HSBP1O75506 76 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 PYYP10082 97 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 IGHV1-2P23083 117 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 BPIFB3P59826 476 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 RHOBP62745 196 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TEPPQ6URK8 271 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 LINC00322Q6ZN03 302 aaPredicted RBP3.96□□□□□ -1.78
LIMA1-214ENST00000552783 MOGAT3Q86VF5 341 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 OR2T6Q8NHC8 308 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 PPP1R35Q8TAP8 253 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 NABP2Q9BQ15 211 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 NAA38Q9BRA0 125 aaKnown RBP3.96□□□□□ -1.78
LIMA1-214ENST00000552783 VPS25Q9BRG1 176 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 OSTCQ9NRP0 149 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 SPG11Q96JI7 2443 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 KLK10O43240 276 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 MPDU1O75352 247 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 SP9P0CG40 484 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 RIPPLY3P57055 190 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TCTAP57738 103 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 UBE2G1P62253 170 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 OR4A47Q6IF82 309 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TRAT1Q6PIZ9 186 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 WFDC8Q8IUA0 241 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 KLHDC1Q8N7A1 406 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 ZBTB34Q8NCN2 500 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 H1FXQ92522 213 aaKnown RBP3.96□□□□□ -1.78
LIMA1-214ENST00000552783 BCL2L2Q92843 193 aaPredicted RBP3.96□□□□□ -1.78
LIMA1-214ENST00000552783 SNRNP40Q96DI7 357 aaKnown RBP3.96□□□□□ -1.78
LIMA1-214ENST00000552783 TAAR6Q96RI8 345 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 PROCRQ9UNN8 238 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 ZNF835Q9Y2P0 537 aa3.96□□□□□ -1.78
LIMA1-214ENST00000552783 IGF2RP11717 2491 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ZFHX3Q15911 3703 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 OR4C46A6NHA9 309 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ISLRO14498 428 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 HLA-DQA1P01909 254 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 MT-ND6P03923 174 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 GNG5P63218 68 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TIGITQ495A1 244 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 RUSC1-AS1Q66K80 236 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 WDR73Q6P4I2 378 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 DUX4L9Q6RFH8 374 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 WDR82Q6UXN9 313 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ACP7Q6ZNF0 438 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TCF24Q7RTU0 167 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 FAM90A1Q86YD7 464 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 OR10W1Q8NGF6 305 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ZNF596Q8TC21 504 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 RND1Q92730 232 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 S1PR3Q99500 378 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TXNDC17Q9BRA2 123 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 IFI27L2Q9H2X8 130 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms